Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1850 ATGGCAGAATCCTATGAGAAGGTTGATGCAACCATTAAGAAGTGGAGTGAGTTAATGCCTCAAGGAACCACATCCATCCATAACTATGAAAACTTGGACAAAATTGGCCACGGATTTTTTAGTGAAGTTTTCAAGGCTAGAGACAAACAAACTGGTGAAACTGTTGCTCTCAAGCAACTTCGGTTGGATTATGACGATCCATTTGtgTTGACGTACTTTTTGAGTGGTATCAATGAAATCAACATTTTAAGGGAATTGGATCATGAAAATGTCATCAAACTCAAACATACCATTTTTCCTAACCCTCAGAGAGATTGGACAGCTGAGAATATTCTTATAAACAGTAATGGTATCCTGAAGCTTGCTGATTTTGGAATGGCTAAGTCAATTACTGGTAATCTCAGGGATCAAAAATTTTCACCTGAAGTTATTGCAATTTCCTACAGGCCCCCAGAGTTGCTGCTAGGGGCATTACAATATGGCACAGCAGTTGATATTTGGTCTGTTGGGTGCCTTTTGGCTGAGCTTCATACTGGCAAAAGAATTTTCAATGGAAAAAATAAGgaagATAGtctaaatcaaatttttgagcTGTGTGGAACACCAAATGAGACCAACTGGCCTGGGGTATCTAATCTTCCTCTCTATACTCAAATGAAGCCATCAATACCAAAGCCTAGAAGACTTGGGAAAGTTTATAAACATGTTGGGAAACACGCTTTGGACTTGTTGGAGAGGATGTTAACGCTTGATCCTAATCAGAGAATTAGTGCTGAGGATGCACTCAAGGCTGACTATTTCCTGACTGATCCATTACCTATCGATCCCAAGAGCTTACCCAAGTTAGAGTCATCATCACATTACTATGTGCTGAACAAAAAGAGTGCGCAAGAGATGCCACCTCCAAAGATGAATTATGTCTCTCAACAAGCATCTAGCAGCAATCATGGTCAGATCAATCCTCATGGGTCAAGAGATGAGTCTAGCTCTGGTTCTACTAAATAG 1005 0.393 MAESYEKVDATIKKWSELMPQGTTSIHNYENLDKIGHGFFSEVFKARDKQTGETVALKQLRLDYDDPFVLTYFLSGINEINILRELDHENVIKLKHTIFPNPQRDWTAENILINSNGILKLADFGMAKSITGNLRDQKFSPEVIAISYRPPELLLGALQYGTAVDIWSVGCLLAELHTGKRIFNGKNKEDSLNQIFELCGTPNETNWPGVSNLPLYTQMKPSIPKPRRLGKVYKHVGKHALDLLERMLTLDPNQRISAEDALKADYFLTDPLPIDPKSLPKLESSSHYYVLNKKSAQEMPPPKMNYVSQQASSSNHGQINPHGSRDESSSGSTK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1850 334 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 19 97 - -
Sto5g1850 334 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 104 297 - -
Sto5g1850 334 SUPERFAMILY Protein kinase-like (PK-like) 22 273 IPR011009 -
Sto5g1850 334 MobiDBLite consensus disorder prediction 293 334 - -
Sto5g1850 334 Gene3D Transferase(Phosphotransferase) domain 1 108 277 - -
Sto5g1850 334 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Sto5g1850 334 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Sto5g1850 334 Pfam Protein kinase domain 29 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1850 334 Pfam Protein kinase domain 104 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1850 334 PANTHER CELL DIVISION PROTEIN KINASE 19 97 - -
Sto5g1850 334 PANTHER CELL DIVISION PROTEIN KINASE 104 297 - -
Sto5g1850 334 MobiDBLite consensus disorder prediction 302 334 - -
Sto5g1850 334 ProSiteProfiles Protein kinase domain profile. 1 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1850 Sto-Chr5 13558230 13561993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1850 103 299 Core Cell Cycle Gene Families AT5G64960 56.219 2.54e-71 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sto5g1850 Pkinase 5.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1850 K08819 - bvg:104896561 249.21