Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1847 ATGGGCTTCTGGGTAACAACGCTGATTTTCTTGGTGATCGGGATAGTTGCTTCCCTTTGTACCCGGGTTAATCTTATGTTGGTTACTTTCTTCATTGTTAACCTTGTAGCCACAATTTCCTTGCTTCAGTTTTGTTTGAAGATTGCACCTAACTTTGGTTATTACCGCAACAGTATGCTGCTGGTTGATGTTCTAGGAAACAAAAGGAAATGTGATGAGAAACTTGTGATCCAGCTTATGTCATTTACAAGGAACTTATGTCATTTCATGTGGGCGATAGTATATCTTGCACAGATGAAACCACTAATTGTACCTGTGCTGAATGAGGGAGAATGA 336 0.3988 MGFWVTTLIFLVIGIVASLCTRVNLMLVTFFIVNLVATISLLQFCLKIAPNFGYYRNSMLLVDVLGNKRKCDEKLVIQLMSFTRNLCHFMWAIVYLAQMKPLIVPVLNEGE 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1847 111 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 75 111 - -
Sto5g1847 111 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 1 23 - -
Sto5g1847 111 Pfam ATP synthase subunit H 3 108 IPR008389 GO:0033179|GO:0046961|GO:1902600
Sto5g1847 111 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 23 IPR008389 GO:0033179|GO:0046961|GO:1902600
Sto5g1847 111 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 75 111 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1847 Sto-Chr5 13530423 13534982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1847 1 111 Primary Pumps ATPases(2) AT5G55290 32.432 5.10e-12 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1847 K02153 - rcu:107262208 69.707