Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1839 ATGGGGAGATTAATAATGGAGGAGGATAATAATGACGAATTCATCTTCCGTAGCAAGCACTCCGGCGTCCCCGTTCCGGACGACGTGACGCTCCCCAAGTTCGTGCTCCGGGATTCCGAGCGGTACGCCGAGAAGGAGGCGTTCGTGGAGGTGGGGAGCGGGAAGAGGATCACGCACGGGGAGGTTGTGAGGGACGTGGAGAGGTTCTCAAAGGCATTGCGATCTCTTGGTGTGAGGAAAGGGAATGTGGTGATTGTGGTTCTTCCTAATGTGGCCGAGTATGCCATCGTTGCTTTGGGGATAATGGCGGCCGGTGGAGTCTTCTCTGGGGCTAACCCTACGGCTCTTGCTTCTGAGATCAAGAAACAAGTGGAATCTGCCGATGCCAAGCTCATTGTCACCAATGGACTCTACTATGAAAAGgTAAAAGATCTAGACCTCCCCATCATTCTCCTCGACGACCAACCCATAGAAGGCACCATAAACTTCCAGAAGCTTCTAGAAGCAGCCGACAAAGCAGGCCACACCCCCCCAAACAACAAATCCTCAGACCCACCCATCTCCCAGAACGACCTCTGTGCCATGCCCTTCTCCTCAGGGACCACTGGCCTCTCCAAGGGCGTCATGCTCACCCACAGGAACCTCGTCGCCAACCTCTGCTCCACCCTCTTCGGGGTCGAGCCAGAGATGGTGGGCCAGGTCACCACCCTAGGGCTCATACCCTTCTTCCACATCTATGGCATCACTGGGATATGTTGTGCCAGCCTCAGGAACAAAGGGAAAGTGGTCGTGATGGGGAGGTTTGAGCTTAGGACGTTCCTTAATGCTTTGATAGCTCATGAGGTGAATTTTGCACCCATTGTGCCTCCCATTATACTGACGTTGGTGAAGAATCCGATTGTGGATGAGTTCGATCTTGGGAGGCTTAAGCTTCGGGCTATTCTCACTGCGGCTGCACCGCTTGCTCCTGAGGTTTTGACTGCGTTTGAGCGCAAGTTCCCTGGTGTTCTTGTTCAAGAGGCATATGGGCTAACAGAACATAGTTGTATCACACTGACTCATGTACAAAAAGATTTTGGCATTTCAAAAAGGAACTCAGTGGGCTTCATCCTCCCTAATTTGGAGGTCAAGTTTATTAATCCTGACACTGCCATTTCCCTCCCAAGAAACACACCCGGTGAGCTTTGTGTCAGAAGCCAATGCGTAATGCAAGGTTATTACAAGCAGGAGGATGATACTGCACAGACAATTGATAAGAATGGGTGGCTTCACACAGGTGACATAGGCTTCATAGATGATGATGACAATGTATTCATCGTTGATCGTATCAAGGAGTTGATTAAGTACAAAGGCTTCCAAGTTGCTCCTGCTGAGTTAGAGGCCATTCTTCTATCTCATCCTTCTGTTGAAGATGCAGCTGTTGTGCCATTAGCAGATGAAGAGGCAGGAGAAATCCCAGGTGCAAGTGTGGTGATGAGCCCAAGCTCCAAAGAGAGTGAAGAAGACATAATGAAGTACGTTGCCTCTAATGTTGCAAGTTACAAGAAAGTGAGGGTGGTTCACTTTGTGGAAGCCATTCCCAAATCACCTTCTGGCAAGATCATGAGGAGGCTTGTCAAAGAGAGGATGGCAGAAAAGATCAtgcgttcttcttcttcttcttcttcatcatcaccatcacaaATCTCTAACAATTAA 1698 0.4847 MGRLIMEEDNNDEFIFRSKHSGVPVPDDVTLPKFVLRDSERYAEKEAFVEVGSGKRITHGEVVRDVERFSKALRSLGVRKGNVVIVVLPNVAEYAIVALGIMAAGGVFSGANPTALASEIKKQVESADAKLIVTNGLYYEKVKDLDLPIILLDDQPIEGTINFQKLLEAADKAGHTPPNNKSSDPPISQNDLCAMPFSSGTTGLSKGVMLTHRNLVANLCSTLFGVEPEMVGQVTTLGLIPFFHIYGITGICCASLRNKGKVVVMGRFELRTFLNALIAHEVNFAPIVPPIILTLVKNPIVDEFDLGRLKLRAILTAAAPLAPEVLTAFERKFPGVLVQEAYGLTEHSCITLTHVQKDFGISKRNSVGFILPNLEVKFINPDTAISLPRNTPGELCVRSQCVMQGYYKQEDDTAQTIDKNGWLHTGDIGFIDDDDNVFIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAVVPLADEEAGEIPGASVVMSPSSKESEEDIMKYVASNVASYKKVRVVHFVEAIPKSPSGKIMRRLVKERMAEKIMRSSSSSSSSSPSQISNN 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1839 565 MobiDBLite consensus disorder prediction 545 565 - -
Sto5g1839 565 Pfam AMP-binding enzyme 38 449 IPR000873 -
Sto5g1839 565 SUPERFAMILY Acetyl-CoA synthetase-like 20 550 - -
Sto5g1839 565 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 8 546 - -
Sto5g1839 565 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 546 - -
Sto5g1839 565 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Sto5g1839 565 Gene3D - 13 444 IPR042099 -
Sto5g1839 565 Gene3D - 445 549 IPR045851 -
Sto5g1839 565 CDD 4CL 25 537 - -
Sto5g1839 565 MobiDBLite consensus disorder prediction 548 565 - -
Sto5g1839 565 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1839 Sto-Chr5 13463064 13469081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1839 7 543 Monolignol Biosynthesis Gene Families AT1G62940 70.872 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1839 K01904 - gmx:100811418 833.172