Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1801 ATGGAATTGTGGTTGCAGAGAGAAGAAGTTTTGTCGTATCGGAGAAATTTGAAGAGGAAGATGCCGCAAGAAAGCAACTGCAACTCATCATTTTTCACATCGCCGTCAAAGAGAGGATTGAAGGCGCTGGTCTCTAACAGCAATGAGGCTTCATGCATTGTCACCGAGGAGATTATCAACGATCATGAATTAGCTCAGAGAAAAGCAGAGGAAGCAGCTTCAAGGAGGTATAAAGCAGCAGAATGGCTGCGTGAGATGGACCATGGCGCATCAGCGTCACTCCCCAAAGAGCCCTCAGAAGAAGAGTTCTGCCTTGCACTCCGCAATGGCCTCATTCTCTGCAACGTCCTCAACAAAGTCAATCCCGGGGCCGTTCTCAAGGTGGTGGACTATCCTACTCTTGCGGTTCAATCTGCAGAAGGCGCGGCTCAGTCTGCCATTCAGTATTTTGAGaatatgagaaattttttgGAGGCAGTGAAGGATATGAAACTCTTGACGTTTGAAGCATCGGATTTAGAAAAGGGCGGTTCATCAAGTAAAGTTGTAGATTGCATTCTCTGTTTGAAAGGATATTATGAATGGAAGCTAGCAGGTGGAGTTGGGGTGTGGAGGTATGGAGGAACTGTGAGGATTACTTCCTTTCCAAAGGGTCCTTCCTCCATAATTGGCAGTGAAAGTACTGATGAATCCCTGGATGAGTCCGAGTCATCGCAATATGAACAGCTACTAGAATTTCTGCATCTATCTAATGAGGTCTCAATTCAAGAAACCAGAACTGTCAATGCTTTGGCTTTCCTATTTGATCACTTTGGACTCAGACTGCTTCAAGCTTACCTTAGAGAGACTGATGGGATTGAAGATCTTCCTATGAATGCAATGGTAATTGATACTTTGCTCAGCAAGGTAGTGAAGGATTTCTCAGCATTGCTTGTTTCTCAAGGCACTCAGCTTGGACTTTTCttgaagaaaatattaaaaggtGATATTGGTTGTCTATCAAAGACAGAGTTCATAGAAGCTATCTCGCTATATCTTGGTCAAAGAAGTAGTTTGGCATCCAAAGATTTCTCAAAATTCTGCATTTGTGGTGGAAAATTTGACAGCACtcggaataataataataattctttaGATCATGCCGAAATAATTAACACTCAACAGAAACAGCTTGAGGGGATGAAATACTTCTTTGAAGAGACAAAAATGGAGGTCAAACAAATTCATTCAGAGTGGGGGCGAGAATTGAGTAGGCTTGAGCATCACATCAAGAGCCTTGAAGTGGCATCTTCTTCCTACCACAAGGTTTTAGAGGAGAATCGCCAACTTTACAATCTAGTACAAGACCTGAAAGGAGCTATTAGAGTCTATTGTAGAGTGAGGCCCTTCTTACCTGGACAATCAAACGGGCAGTCAACAGTAGATTATATAGGAGAAAATGGAAGCATCATGATTGTCAATCCCCTTAAGCAGGGGAAAGATGCAAGAAGGGTGTTTTCATTCAATAAGGTGTTTGCAACAAATGTGACACAAGAACAAATATATGCTGATACACAACCGTTGATCAGATCTGTTTTAGATGGCTATAATGTATGCATATTTGCGTATGGACAGACTGGCTCAGGGAAGACATACACAATGAGTGGCCCTGATCTGACGACTGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGatttattccatatatcaaaGGAAAGAGTGAATGCCATAAAATATGAAGTTGGAGTCCAGATGATTGAAATATACAATGAACAAGTCAGAGATTTATTATTGAATGGCCTTAATGTGCCTGATGCATGTTTAGTCCCAGTTAATTGTACACAAGATGTTCTTGATTTAATGAGGATTGGTCAGAAGAACCGAGCCGTGGGTGCTACAGCCTTAAATGAGCGAAGCAGCCGTTCTCATAGTATTTTGACAGTTCATGTCAGAGGAAGAGAGCTAGTTTCTAACTCCATTCTTAAAGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAAAGAGTGGACAAATCTGAGGCTGTTGGAGAAAGATTAAAGGAGGCACAACATATAAATAGATCTCTTTCTGCACTTGGAGATGTTATATATGCTTTGGCACAGAAGAGTCCACATATTCCTTACAGAAACAGCAAGCTCACACAAGTATTACAAGATTCCTTAGGTGGGCATGCCAAAACTTTGATGTTTGTTCATATAAATCCGGAACAGAATGCTCTTGGGGAGACAATTAGCACACTCAAGTTTGCTGAGAGGGTGGCATCTATTGAACTTGGTGCTGCTCAATCTAATAAGGAAACTGGTGAAATCAGAGAGCTCAAAGATGAGATATCAAACCTCAAATTGGCGTTGGAGAGGAAGGAAACTGAACTAGAACAACTTAGAGCTGGAAATGCTCGAAACACAGCAGAATCTCAAAAACAAAGGGCTCTTTCACCTTTTCGCCTACCCAAAAATGGCGTCAATTCCAGCTTGAAGCCTGAAATTTTCCAACGTCCAAGTGATGATAGAATTTCTGAGGCTAGAAGTTGTTCTTCAGGAAAGCAAAGGAGGTCAAGGTTTCCCTCCTCATTCATGGACAAAGAATCCATTCCAAGAATGCCTCTTCTAGCTGAAGAAAAGATAGCAAGCtcaggaaagggaagatcaccaTCTCCTCCTATCAGGAGATCACTATCCACCGACAGAGGATCCGTCATTAAAAGCAAGGCCAAAATTGACACATCAGATAACCAACCGATAGTAAAACATCCATTTCCAGCTAGAGTACCAGTAAATAAATCTCTTTCCCCAATGCCTATTGCTCCATGCATCGACAACAACTCAAGGATGTATGCAAATTCACACGAACCAGTGAAACAGGATAACATTTCTGAAAGTCTCTTCAACCTCCAGAAGGTTAACTTCAGGAAAGTTcatcaagaacaagaagaagaacagTTTAAGCATTCACTTAATGCGGTAAGACAAGGTGGTATTAGAAAGATCAAGCCTGAGGGGAAGGTTAAGGCcaagcatcatcatcatcatcaacagcTCCCATTTAGGATTCAGAAGTCTGATTTGATGCCTACATTGTTCCCTGAAAtggacttttccggcgagaagacAATGGATGCGCCTCGAAAGAGTGATTACTCTGAGCCGGAAAATGATGATGGCCTAATTGAGTCCCCAGTCCACAGtgctttaaaccttaaaaagatACGCCAGAACTTCCCAAGGAATTCTCAGAACCTTGAACCAAGAGGAACACTGCAAGCAGGGGAACCCTTATTAGCTAGCAGAGTTGAAAACAAACTTCTAAATGGTTCAGGCAGAAATCTCAAGGAAGGCAGCAATACTTCCATGCCTGAATTTAGAAGAAGCAGATCAACCCCGCGTGGAAAATTCCTTTTATCTTGA 3432 0.4015 MELWLQREEVLSYRRNLKRKMPQESNCNSSFFTSPSKRGLKALVSNSNEASCIVTEEIINDHELAQRKAEEAASRRYKAAEWLREMDHGASASLPKEPSEEEFCLALRNGLILCNVLNKVNPGAVLKVVDYPTLAVQSAEGAAQSAIQYFENMRNFLEAVKDMKLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLAGGVGVWRYGGTVRITSFPKGPSSIIGSESTDESLDESESSQYEQLLEFLHLSNEVSIQETRTVNALAFLFDHFGLRLLQAYLRETDGIEDLPMNAMVIDTLLSKVVKDFSALLVSQGTQLGLFLKKILKGDIGCLSKTEFIEAISLYLGQRSSLASKDFSKFCICGGKFDSTRNNNNNSLDHAEIINTQQKQLEGMKYFFEETKMEVKQIHSEWGRELSRLEHHIKSLEVASSSYHKVLEENRQLYNLVQDLKGAIRVYCRVRPFLPGQSNGQSTVDYIGENGSIMIVNPLKQGKDARRVFSFNKVFATNVTQEQIYADTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLTTEETWGVNYRALRDLFHISKERVNAIKYEVGVQMIEIYNEQVRDLLLNGLNVPDACLVPVNCTQDVLDLMRIGQKNRAVGATALNERSSRSHSILTVHVRGRELVSNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVIYALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEQNALGETISTLKFAERVASIELGAAQSNKETGEIRELKDEISNLKLALERKETELEQLRAGNARNTAESQKQRALSPFRLPKNGVNSSLKPEIFQRPSDDRISEARSCSSGKQRRSRFPSSFMDKESIPRMPLLAEEKIASSGKGRSPSPPIRRSLSTDRGSVIKSKAKIDTSDNQPIVKHPFPARVPVNKSLSPMPIAPCIDNNSRMYANSHEPVKQDNISESLFNLQKVNFRKVHQEQEEEQFKHSLNAVRQGGIRKIKPEGKVKAKHHHHHQQLPFRIQKSDLMPTLFPEMDFSGEKTMDAPRKSDYSEPENDDGLIESPVHSALNLKKIRQNFPRNSQNLEPRGTLQAGEPLLASRVENKLLNGSGRNLKEGSNTSMPEFRRSRSTPRGKFLLS 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1801 1143 MobiDBLite consensus disorder prediction 803 907 - -
Sto5g1801 1143 ProSiteProfiles Calponin homology (CH) domain profile. 73 194 IPR001715 GO:0005515
Sto5g1801 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 454 802 IPR027417 -
Sto5g1801 1143 Pfam Kinesin motor domain 459 765 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1801 1143 MobiDBLite consensus disorder prediction 1110 1143 - -
Sto5g1801 1143 PANTHER KINESIN-LIKE PROTEIN KLP-3 38 1139 - -
Sto5g1801 1143 MobiDBLite consensus disorder prediction 1038 1066 - -
Sto5g1801 1143 SUPERFAMILY Calponin-homology domain, CH-domain 71 214 IPR036872 -
Sto5g1801 1143 Gene3D - 65 194 IPR036872 -
Sto5g1801 1143 SMART kinesin_4 451 773 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1801 1143 MobiDBLite consensus disorder prediction 1044 1059 - -
Sto5g1801 1143 MobiDBLite consensus disorder prediction 804 818 - -
Sto5g1801 1143 SMART ch_5 75 192 IPR001715 GO:0005515
Sto5g1801 1143 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 38 1139 - -
Sto5g1801 1143 Pfam Calponin homology (CH) domain 75 194 IPR001715 GO:0005515
Sto5g1801 1143 Coils Coil 772 813 - -
Sto5g1801 1143 ProSiteProfiles Kinesin motor domain profile. 453 765 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1801 1143 MobiDBLite consensus disorder prediction 839 856 - -
Sto5g1801 1143 MobiDBLite consensus disorder prediction 1115 1131 - -
Sto5g1801 1143 Gene3D Kinesin motor domain 396 767 IPR036961 -
Sto5g1801 1143 PRINTS Kinesin heavy chain signature 528 549 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1801 1143 PRINTS Kinesin heavy chain signature 635 652 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1801 1143 PRINTS Kinesin heavy chain signature 666 684 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1801 1143 PRINTS Kinesin heavy chain signature 715 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1801 Sto-Chr5 13141452 13151797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1801 389 765 Calmodulin-binding Proteins AT5G65930 38.945 3.97e-72 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1801 K10406 - gmx:100793458 1743.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1801 5 13141452 13151797 Sto5g1801 5 13141452 13151797 ECH