Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1800 ATGAGCCCAAAGCCGTCGttcatatctatctatctatctatctatactAAAATTGTGCATTGCTTTCCCTGTAATCTCTCTTTCTCCGATTCAATTCTGAAGAGCTCTTCAGaaaCTGGTAATTTCATTCTTGATTGGATCTTGATTCTTGATGATGTGGTTATCCATGCAGCTGTTGTGCTCGAAGTTAAGGTGAAGGCTAGCTCTGTCAGTAGGTCTTTGTCAATGGATGCTGATACTGTTGCAGATTTAATAGAGTCATCCTCTGGGGTTCATTTTTCTGGATTTCACATGGATACATTGGAGAAAGTAAATGCTGGGACAGAGCCACCAACAACTTCTGCAACTGCCCATATGTATAATCAACCTTTTGTCATAGAAAATGTCACCAAACCTGCTTTATGTCCAATGAATGTGGTTCAATCTTTAGAGAAGCCATCAGGTTGTGTGTTACATGAACGAGGTGTTGCTGGGGGAGCATCAGCTGGGAAAACTACAGTTTGTAATATGATTTTTCAGCAACTTCATGACCAACGAGTTGTAGTTGTTAATCAGGATTCTTTTTATCATAATCTGACGGAGGAAGAACTTACTAGAGTACAGGATTACAACTTTGACCATCCTGATGCATTTGATACTGAGCAATTGCTAGGAGTTATGGACAAATTGATGCATGGACAAGCTGTAGATATACCAAACTATGACTTCAAGAGTTACAAAAGTGATGCATTTCCAGCAAGACGGGTAAACCCAGCTGATGTTATAATTTTGGAAGGAATTCTTGTTTTCCATGACCCACGCGTTCGGGAgttgatgaatatgaagataTTTGTTGATACAGTTATATTTAAGTCTATACAATTAAGTCTCTTCAATGTAATTCCAAGTCATGCTATCACTTCACATTGGAACATGTTCAGCGCAGATGCTGATGTTCGATTGGCAAGGAGGATCAAGCGTGATACTGTTGAGAAGGCTCGGGATGTTAGTGCAGTGCTTGATCAGTATTCTAAATTTGTGAAGCCAGCTTTTGATGACTTTATTCTCCCAACAAAGAAGTATGCCGATATCATTATACCCCGTGGAGGTGATAATCATGTGGCCATTGACTTAATTGTACAGCATATTCGCACAAAGCTTGGTCAGCATGATCTATGTAAAATATATTCTAACCTATATGTTATACAATCAACTTTTCAGATACGGGGTATGCATACCTTGATACGTGATTCTCAGATAACGAGGGatgattttgtattttattctgACCGTTTGATTCGTCTGGTTGTCGAACATGGCCTAGGACATTTGCCGTTTACAGAAAAGCAAGTAATCACTCCAACTGAATCTGTATACACTGGTGTGGATTTTTGCAAGAGGTTATGTGGGGTCTCTGTCATCAGGAGTGGGGAGAGCATGGAGAATGCTTTAAGAGCATGTTGTAAAGGTATCAAGATTGGGAAAATTCTTATTCATAGAGAAGGTGACAATGGTCAGCAGCTGATATATGAAAAGTTACCTAATGATATCTCAGATAGGCATGTGTTACTATTGGATCCCATCCTAGGAACAGGAAATTCGGCTGTTCAAGCAATTTCTTTACTTATAAGAAAGGGTGTACCAGAGTCCAACATTATATTTCTCAATCTCATATCAGCACCCCAAGGTGTGCATGTGGTATGCAAAAGCTATCCCAAAATAAAAATCGTGACGTCCGAGATCGATACCGGTTTGAATAAAGACTTTCGCGTCATACCTGGCATGGGTGAGTTCGGAGACCGTTATTTTGGCACAGATGATGATTATCAGCAGGTGGTGGCCCCTTCACAGTAG 1833 0.3901 MSPKPSFISIYLSIYTKIVHCFPCNLSFSDSILKSSSETGNFILDWILILDDVVIHAAVVLEVKVKASSVSRSLSMDADTVADLIESSSGVHFSGFHMDTLEKVNAGTEPPTTSATAHMYNQPFVIENVTKPALCPMNVVQSLEKPSGCVLHERGVAGGASAGKTTVCNMIFQQLHDQRVVVVNQDSFYHNLTEEELTRVQDYNFDHPDAFDTEQLLGVMDKLMHGQAVDIPNYDFKSYKSDAFPARRVNPADVIILEGILVFHDPRVRELMNMKIFVDTVIFKSIQLSLFNVIPSHAITSHWNMFSADADVRLARRIKRDTVEKARDVSAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYSNLYVIQSTFQIRGMHTLIRDSQITRDDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTESVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIRKGVPESNIIFLNLISAPQGVHVVCKSYPKIKIVTSEIDTGLNKDFRVIPGMGEFGDRYFGTDDDYQQVVAPSQ 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1800 610 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 372 IPR027417 -
Sto5g1800 610 Pfam Phosphoribulokinase / Uridine kinase family 308 367 IPR006083 GO:0005524|GO:0016301
Sto5g1800 610 Pfam Phosphoribulokinase / Uridine kinase family 155 281 IPR006083 GO:0005524|GO:0016301
Sto5g1800 610 PANTHER URIDINE KINASE 90 143 - -
Sto5g1800 610 PANTHER URIDINE KINASE 307 601 - -
Sto5g1800 610 PANTHER URIDINE KINASE 154 280 - -
Sto5g1800 610 PANTHER URIDINE KINASE 154 280 - -
Sto5g1800 610 PANTHER URIDINE KINASE 90 143 - -
Sto5g1800 610 PANTHER URIDINE KINASE 307 601 - -
Sto5g1800 610 PRINTS Uridine kinase signature 151 168 - -
Sto5g1800 610 PRINTS Uridine kinase signature 181 192 - -
Sto5g1800 610 PRINTS Uridine kinase signature 226 241 - -
Sto5g1800 610 SUPERFAMILY PRTase-like 382 599 IPR029057 -
Sto5g1800 610 Gene3D - 383 598 IPR029057 -
Sto5g1800 610 CDD UMPK 155 379 IPR000764 -
Sto5g1800 610 Gene3D - 155 382 IPR027417 -
Sto5g1800 610 Pfam Uracil phosphoribosyltransferase 397 598 - -
Sto5g1800 610 CDD PRTases_typeI 456 571 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1800 Sto-Chr5 13112927 13123462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1800 76 601 PRT Gene Family AT4G26510 73.245 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1800 K00876 - zju:107407445 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2071 9 24626377 24633707 Sto5g1800 5 13112927 13123462 CCT