Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1772 ATGCTAGCTGCTGCTTCTTTTGCTTCCAAACGCATTCGAGCTTCGGAGCTTCTTCAACGCGATGCTAGACCCGGGATAGTATCACACCGTGTCGTTGCCATAAGTTGTTTTGAACCTTCTGCTTGTGTTGATTTGAGTAGGAACAATTGGAATTGCAATCAGGATCGATCATTTGTTAGTAGAATTGGCAGAGATGGTTTCAGTTTCAATCGGAGTGCTCCCAGAAGATGTCCAAGTTTACTTTATAGTATAAAAGGGTTTCTCTCTGATTCATCACCTTCCAGTTCCTCTTCTTCGCTATATAGCAGAGTGGCTAGACCTTGCTTTACACAACCTAATTCAACTCTAGATGGGCGAGCATTGTTCTCAACTAAAACTGATGATGGATCGCCCTCAAAGAAGAGCGAGACACAGAACCAAAAAACTACTACCTCAGTTGCTAAAACACCATCAGAGGAACAAATTGCTGACACCAAAATCCTCCGCACACTTGCTAGTTACTTGTGGATGAAAGATAATCTTGAATTCCGATTTCGGGTTATTGCTGCTTTGGGTTTTCTTGTAGGTGCTAAGGTTCTGAATGTTCAGGTCCCTTTCTTATTCAAGCTTGCAGTTGATTGGTTGACGACTGCAACCGGCAATGCTGGTGCCCTTGCATCTTTTACAGCTGCAAATCCAACTATGTTGGCTCTTTTTGCAACCCCTGCAGCTGTGTTAATCGGATATGGAATTGCACGTACAGGAGCTTCTGCTTTCAACGAACTGCGTACTGCTGTATTTTCTAAGGTGGCACTGCGAACAATTCGATTAGTATCTAGAAAGGTGTTCTCGCATTTGCATGACCTTGACCTACGGTATCATCTAAGGTATTGCTTATGCCATGCTGAGAAGGCTAATATATTTTGGGTTGGGACTTGGGGACTTTGGGTTGTTAGGCTGGGAATGGGAGAAGGAAAATGGGAGGCCATAAGTGGAGGGTTGGGATATAGAAGGCTAAAACTTAAGATATCTATGGTATCAGGTATACTGGCCTACAAATTTGGAGCACCTTTTGCGTGGATCACATCACTATCAGTTGCCGCTTATGTTATTTTTACACTGACTGTCACACAGTGGAGGACTAAGTTCAGGAAGGCCATGAATAAAGCTGATAATGATGCAAGTACCAGGGCAATTGATTCGCTCATTAATTATGAGaCTGTCAAATATTTCAATAATGAAGCCTTTGAAGCTGAAAAATATGATGAGTACCTAAAGAGATATGAAGATGCGGCTCTAAAAACCCAGCGCAGTCTTGCTTTTTTGAACTTTGGCCAAAATGTTATATTTAGTACTGCTCTTTCAACAGCAATGGTGTTGTGTTCTCATGGGATTATGAATGGCCAGATGACTGTTGGTGATTTGGTGATGGTGAATGGGCTTCTCTTCCAATTGTCTCTTCCACTCAATTTCCTTGGTAGTGTTTATCGCGAGACTATACAGAGTTTAGTTGACATGAAGTCCTTGTTTCAATTACTGGAGGAAAGAGCTGATGTGAGGGATAGAGACAATGCAAAGCCTCTGAAATTAAAGGGAGGGAGCATCCAGTTTGAAAATGTACATTTCAGTTACCTTGCAGAAAGAAAAATACTTGATGGAATATCTCTTGTTGTACCAGCTGGAAAAAGTGTGGCAATTGTTGGAACTAGCGGAAGTGGCAAATCAACCATTCTTAGACTGATCTTCAGGTTTTTCGATCCACATTCTGGAACTATAAAGATAGATGGTCAAGATATCCACGATGTAACCCTTGATAGTCTACGAAAGTCTGTAGGTGTTGTTCCACAAGATACTGTACTTTTCAATGATACAATTTTTCACAACATTCACTATGGTCGGCTCTCAGCAACTAAAGAGGAGGTCTTTGAAGCTGCTCGACAAGCAGCAATTCACGACACTATCATGAATTTTCCTGAGAAATATTCAACTGTTGTGGGAGAACGAGGACTCAAGTTAAGTGGTGGTGAGAAGCAACGCGTTGCTTTAGCCCGTGCCTTTTTGAAAGCGCCTCCAATTTTGTTGTGTGATGAAGCTACAAGTGCACTTGACAGCACAACAGAAGCAGAGATATTGAGTGCATTGAAATCTTTGGCAAATAATCGAACTTCTATATTCATTGCTCACAGACTTACCACTGCAATGCAGTGTGATGAGATTGTAGTGTTGGAAAATGGAAAGGTGGTTGAACAAGGACCACATGAACTGCTGTTAACTAAGGGAGGAAGATATGCACAGCTTTGGGGACAGCAAAATAACACAGTGGATGCAATTGATGCAGCCATCAAAGTTGGGTCCTAA 2337 0.4189 MLAAASFASKRIRASELLQRDARPGIVSHRVVAISCFEPSACVDLSRNNWNCNQDRSFVSRIGRDGFSFNRSAPRRCPSLLYSIKGFLSDSSPSSSSSSLYSRVARPCFTQPNSTLDGRALFSTKTDDGSPSKKSETQNQKTTTSVAKTPSEEQIADTKILRTLASYLWMKDNLEFRFRVIAALGFLVGAKVLNVQVPFLFKLAVDWLTTATGNAGALASFTAANPTMLALFATPAAVLIGYGIARTGASAFNELRTAVFSKVALRTIRLVSRKVFSHLHDLDLRYHLRYCLCHAEKANIFWVGTWGLWVVRLGMGEGKWEAISGGLGYRRLKLKISMVSGILAYKFGAPFAWITSLSVAAYVIFTLTVTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNEAFEAEKYDEYLKRYEDAALKTQRSLAFLNFGQNVIFSTALSTAMVLCSHGIMNGQMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSLFQLLEERADVRDRDNAKPLKLKGGSIQFENVHFSYLAERKILDGISLVVPAGKSVAIVGTSGSGKSTILRLIFRFFDPHSGTIKIDGQDIHDVTLDSLRKSVGVVPQDTVLFNDTIFHNIHYGRLSATKEEVFEAARQAAIHDTIMNFPEKYSTVVGERGLKLSGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILSALKSLANNRTSIFIAHRLTTAMQCDEIVVLENGKVVEQGPHELLLTKGGRYAQLWGQQNNTVDAIDAAIKVGS 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1772 778 Gene3D - 519 774 IPR027417 -
Sto5g1772 778 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 181 494 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto5g1772 778 Pfam ABC transporter 544 693 IPR003439 GO:0005524
Sto5g1772 778 CDD ABC_6TM_ATM1_ABCB7 183 502 - -
Sto5g1772 778 CDD ABCC_ATM1_transporter 528 763 - -
Sto5g1772 778 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 517 763 IPR027417 -
Sto5g1772 778 PANTHER BNAA10G12020D PROTEIN 118 768 - -
Sto5g1772 778 SUPERFAMILY ABC transporter transmembrane region 175 289 IPR036640 GO:0005524|GO:0016021
Sto5g1772 778 ProSitePatterns ABC transporters family signature. 665 679 IPR017871 GO:0005524
Sto5g1772 778 Gene3D ABC transporter type 1, transmembrane domain 331 518 IPR036640 GO:0005524|GO:0016021
Sto5g1772 778 Gene3D ABC transporter type 1, transmembrane domain 167 291 IPR036640 GO:0005524|GO:0016021
Sto5g1772 778 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 118 768 IPR039421 -
Sto5g1772 778 MobiDBLite consensus disorder prediction 135 149 - -
Sto5g1772 778 MobiDBLite consensus disorder prediction 115 149 - -
Sto5g1772 778 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 528 762 IPR003439 GO:0005524
Sto5g1772 778 SUPERFAMILY ABC transporter transmembrane region 339 508 IPR036640 GO:0005524|GO:0016021
Sto5g1772 778 Pfam ABC transporter transmembrane region 340 481 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto5g1772 778 SMART AAA_5 553 739 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1772 Sto-Chr5 12827022 12839261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1772 364 764 Calmodulin-binding Proteins AT2G36910 36.650 4.71e-66 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1772 K05662 - gmx:100779975 1020.76