Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1753 ATGGCCGACGTGGAAGCTCCACCCCGAATCCTCGATCCCTCCGAGGCAGTCGTCGACGTCAAGCTCTTCAATCGCTGGACCTTCGATGATGTTCAGGTAAATGACATTTCCTTGGCTGATTACATTGGTGTGGCACCTGCCAAGCATGCAACATATGTTCCCCACACTGCTGGGAGGTATTCGGTCAAGCGATTCAGGAAAGCTCAGTGTCCGATTGTCGAGAGACTTACCAACTCTCTTATGATGCACGGACGAAATAACGGGAAAAAACTTATGGCAGTGAGGATTATAAAGCATGCAATGGAAATTATCCACTTGCTGACTGATCAAAATCCTGTCCAAGTTATTGTTGATGCTGTGATAAACAGGGAAGATGCTACACGAATTGGATCTGCTGGTGTCGTCAGACGTCAAGCAGTGGATATTTCTCCCCTGCGACGCGTGAACCAGGCAATTTATCTCCTTACTACAGGTGCTCGTGAGGCTGCATTCAGGAACATTAAGACAATCGCAGAATGCTTGGCGGATGAACTTATCAATGCTGCAAAGGGGTCATCGAACAGCTATGCCATTAAGAAGAAGGACGAGATCGAGAGAGTTGCTAAGGCCAACCGTTGA 618 0.479 MADVEAPPRILDPSEAVVDVKLFNRWTFDDVQVNDISLADYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPVQVIVDAVINREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1753 205 Gene3D Ribosomal protein S7 domain 7 205 IPR036823 -
Sto5g1753 205 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 2 205 IPR000235 GO:0006412
Sto5g1753 205 CDD uS7_Eukaryote 21 205 IPR005716 GO:0003735|GO:0006412|GO:0015935
Sto5g1753 205 ProSitePatterns Ribosomal protein S7 signature. 74 100 IPR020606 GO:0003723|GO:0003735|GO:0006412
Sto5g1753 205 PANTHER 40S RIBOSOMAL PROTEIN S5 11 205 - -
Sto5g1753 205 Pfam Ribosomal protein S7p/S5e 62 205 IPR023798 -
Sto5g1753 205 SUPERFAMILY Ribosomal protein S7 21 205 IPR036823 -
Sto5g1753 205 TIGRFAM uS7_euk_arch: ribosomal protein uS7 20 205 IPR005716 GO:0003735|GO:0006412|GO:0015935
Sto5g1753 205 PANTHER RIBOSOMAL PROTEIN S7 11 205 IPR000235 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1753 Sto-Chr5 12667354 12668948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1753 19 205 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 90.000 1.49e-128 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1753 K02989 - mnt:21395650 360.147