Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1749 atggATTCTCATCAAagtgttgatgatgatgatcatccATTCCTGATTGCATACAATATGGCAATGAGTATGATGCTTCCTGCAGTTCTGAAAGCCGCCATAGAACTGAAGCTATTTGATATCattgaaagagaaggaaaaggaatGATGTCTCCTTCACAGATTGCTTCTCACATCCCAATATCTCCATACCCTAACTTGACTCTCAAGTTAGATCGAATGCTTCGTCTTCTTGCTTCCCACTCACTTCTCACTTGCTCTTTGCAAACTGATGATGATGAGAGGAGTTATGGCCTCTCTCCTGCTGGCAAATACTTTGTGTCGAATTTCAAGGAGGCAATCCTTGATGAAGGCTCTGACTTGTTCAAGAAAATTCATGGGAAGTATTCATCATTATACCATTATCTAGAAACGTCCGATGGTGCAGAGCTAAGAAAGGACTTCCATATTTCAATGACGGATTTGTCCATCATGCAGATGGAGAAAGTTCTAGAAGCATATCAAGGATTCGAGGGAATCTCTACTTTGATAGATGTTGGAGGAAGCAATGGAATGTGTCTCAATATGATTCTTTCTAAATATCCTTCCATTAAGGCTATTAACTTCGATTTGCCCCAAGTAGTCCAGCATGCTCCATCATATCCCGGAATTGAGCATGTTGGAGGAAATATGCTTGAAAGCATCCCAAAGGGTGCTGATGCCATCATGTTAAAGCATGTGTGCCATAACTGGGAGGATGCAAAATGCCTTGAATTTCTGAAGAATTGCTATGAAGCACTAGAAGAGAAGGGGAAAGTGATAGTGATAGATTTGATAACACCAGAAGTACCAGATTCAAGTACTGGTTCGAATCATGTCTCGAGCCTTGACAACTTCATGTTCTTCACGCCTGGTGGAAGAGAAAGAACACTCAGAGAATTTCAGTTCCTCTGCAAATCTGCTGCCTTCTCCAACTTCCATCTTGCGTGCACTTTCTACTCTGTCTATGGAGTCATGGAATTccacaaataa 1011 0.3917 MDSHQSVDDDDHPFLIAYNMAMSMMLPAVLKAAIELKLFDIIEREGKGMMSPSQIASHIPISPYPNLTLKLDRMLRLLASHSLLTCSLQTDDDERSYGLSPAGKYFVSNFKEAILDEGSDLFKKIHGKYSSLYHYLETSDGAELRKDFHISMTDLSIMQMEKVLEAYQGFEGISTLIDVGGSNGMCLNMILSKYPSIKAINFDLPQVVQHAPSYPGIEHVGGNMLESIPKGADAIMLKHVCHNWEDAKCLEFLKNCYEALEEKGKVIVIDLITPEVPDSSTGSNHVSSLDNFMFFTPGGRERTLREFQFLCKSAAFSNFHLACTFYSVYGVMEFHK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1749 336 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 336 IPR016461 GO:0008168
Sto5g1749 336 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 333 IPR029063 -
Sto5g1749 336 SUPERFAMILY "Winged helix" DNA-binding domain 9 109 IPR036390 -
Sto5g1749 336 Pfam O-methyltransferase domain 109 317 IPR001077 GO:0008171
Sto5g1749 336 PIRSF O-mtase 2 111 IPR016461 GO:0008168
Sto5g1749 336 PIRSF O-mtase 107 336 IPR016461 GO:0008168
Sto5g1749 336 PANTHER O-METHYLTRANSFERASE 108 336 IPR016461 GO:0008168
Sto5g1749 336 PANTHER O-METHYLTRANSFERASE 7 107 IPR016461 GO:0008168
Sto5g1749 336 Gene3D Vaccinia Virus protein VP39 145 324 IPR029063 -
Sto5g1749 336 Pfam Dimerisation domain 29 79 IPR012967 GO:0046983
Sto5g1749 336 Gene3D - 25 163 IPR036388 -
Sto5g1749 336 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 108 336 - -
Sto5g1749 336 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 7 107 - -
Sto5g1749 336 CDD AdoMet_MTases 175 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1749 Sto-Chr5 12644357 12646795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1749 10 328 Monolignol Biosynthesis Gene Families AT5G54160 44.092 2.11e-92 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1749 - - qlo:115965339 338.576