Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1722 ATGAGAGCGCCCAGAATGCGGTGGACTACGACACTCCACGCGCGCTTCGTTCACGCCGTTGAGCTTCTCGGCGGCCATGAAAggGCGACTCCGAAGTCGGTTTTGGAGCTGATGGATGTGAAGGATCTCACATTAGCTCATGTGAAAAGCCATTTACAGATGTATCGAACTGTTAAAACCACTGACAAGCCTGCCGCTTCTTCAGGGCATTCGGATGGGTCTGGAGATGATGAGATGTTCACAGATCAAATTAGGGGAAGGGCAGATCGGTCAGTGCAGCAAGATATGGATTACTCTTCTACAACCACTACTCTTTGGTGTAATTCTTCAAGTAGTAGAGAGCCATGGCCACACAATAGTACTAAAGACAATGATCATAATATGAGACCACCCACCCTCCATTCACAACCACTAGGAGGGCATCAAgttcagATAATTCTCTTCACTATGGAAGTGGCACATAACTTAAAGTAG 474 0.462 MRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGDDEMFTDQIRGRADRSVQQDMDYSSTTTTLWCNSSSSREPWPHNSTKDNDHNMRPPTLHSQPLGGHQVQIILFTMEVAHNLK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1722 157 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 4 57 IPR006447 GO:0003677
Sto5g1722 157 SUPERFAMILY Homeodomain-like 2 58 IPR009057 -
Sto5g1722 157 MobiDBLite consensus disorder prediction 102 117 - -
Sto5g1722 157 Gene3D - 3 60 - -
Sto5g1722 157 PANTHER TRANSCRIPTION REPRESSOR KAN1 1 144 - -
Sto5g1722 157 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 144 IPR044847 GO:0000976|GO:0006355|GO:0010158
Sto5g1722 157 MobiDBLite consensus disorder prediction 102 137 - -
Sto5g1722 157 MobiDBLite consensus disorder prediction 59 80 - -
Sto5g1722 157 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Sto5g1722 157 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 60 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1722 Sto-Chr5 12368053 12373563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1722 1 129 G2-like Transcription Factor Family AT5G16560 65.493 9.56e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto5g1722 Myb_DNA-binding 4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1722 - - ccaj:109796302 221.476