Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1717 ATGATAGCTCATCTATTCAATGCACCACTTGGAGAGTCGGAGGCTGCAGTTGGAGTGGGCACAGTCGGGTCATCAGAGGCCATAATGTTGGCTGGATTGGCTTTCAAAAGAAAGTGGCAAAACAAAATGAAAGCAGCCGGCAAGCCTTGTGACAAACCCAACATTGTCACCGGCGCCAACGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTCGAAGTGGAGCTGAAGGAAGTGAAGCTGAGGGAAGGTTATTACGTAATGGACCCAGAAAAGGCAGTGGAAATGGTGGATGAGAACACCATCTGTGTTGCTGCTATCCTTGGCTCTACTCTCAATGGAGAATGGGATACGCCAATTCATGTGGATGCAGCGAGTGGTGGGTTCATCGCACCATTTATATACCCAGAGCTTGAGTGGGACTTCAGGTTGCCACTAGTGAAGAGCATAAACGTGAGTGGACACAAGTATGGTCTTGTCTACGCCGGCATTGGTTGGGTCATCTGGAGAAGCAAGGAGGACTTGCCTGAGGAGCTCATCTTCCACATTAACTATCTCGGTGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCAAGTCAAGTTATTGCTCAGTACTACCAACTCATTCGCTTGGGTTATGAGGGATATAGGAACGTGATGGAAAATTGTAGGGACAACATGCTGGTCCTAAAGGACGGCCTAGAGAAAACAGGTAAATTCACCATTGTCTCCAAAGACGACGGTGTCCCATTGGTGGCTTTCTCCCTCAAGGACAACTCCCGGTTCAACGAGTTCCAGGTGTCCGACTTGCTCCGCCGGTTCGGCTGGATCGTGCCGGCCTACACCATGCCTCCCGACGCACAGCACGTGACCGTCCTACGTGTCGTCATCCGGGAGGACTTCTCGCGGACGCTGGCGGAGCGGCTGGTGCTGGACGTCCAGAAGGTTCTGGCTGAGCTGGAGCTGCTGCCTCCCAAGGCGGTGCTGACTACCACCACCGCCGTGACGGAGGAGGTGGCCGCCAATAACGGCGTCGGAGGTACTGTGGTTACTAAGAAGAGTGCCTTGGAGACACAGAGGGAGATCACTACTATTTGGAAGAAGTTCGTGATGCAGAGGAAGAAGATTAATGAGAAGATGAGTGGTGTTTGCTAG 1164 0.5189 MIAHLFNAPLGESEAAVGVGTVGSSEAIMLAGLAFKRKWQNKMKAAGKPCDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPEKAVEMVDENTICVAAILGSTLNGEWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMLVLKDGLEKTGKFTIVSKDDGVPLVAFSLKDNSRFNEFQVSDLLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDVQKVLAELELLPPKAVLTTTTAVTEEVAANNGVGGTVVTKKSALETQREITTIWKKFVMQRKKINEKMSGVC 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1717 387 PANTHER GLUTAMATE DECARBOXYLASE 1 387 IPR010107 GO:0004351|GO:0006536|GO:0030170
Sto5g1717 387 PANTHER GLUTAMATE DECARBOXYLASE 1 387 - -
Sto5g1717 387 Gene3D - 1 239 IPR015421 GO:0003824
Sto5g1717 387 Pfam Pyridoxal-dependent decarboxylase conserved domain 1 260 IPR002129 GO:0016830|GO:0019752|GO:0030170
Sto5g1717 387 SUPERFAMILY PLP-dependent transferases 1 323 IPR015424 -
Sto5g1717 387 Gene3D - 240 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1717 Sto-Chr5 12303840 12306092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1717 1 387 Calmodulin-binding Proteins AT5G17330 76.355 0.0 640
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1717 5 12303840 12306092 Sto5g1717 5 12303840 12306092 ECH