Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1696 ATGATTCTGTATGGCTGTCCTAACCCTCATTCCTTGGAGTATATCTTCAACAAGATCAGAAGGCTATTGGATAGTGGGAAATTTatgtctcttaatttttttgatagagAGAGCAATAGGTTGGCTGACGCGTTAGCTCATTATGGCCATTCTCTCCCTTTGGATGTTAGTATCTTTGATGATTGTCCTGTTTTCTGTAGGGGTATAGCCCTTGATGATTTGTATTCATCCTTCTTCACCTCCATGGAGTTTGGATTTTTTCGTGGGCTGCCTGAGGATCTCTTTATATTGGACATCATTGGACAATTAGCTTTTCTTGTAGATATTGTTTTGCAGTTTTTTGTCGCTTATAGAGACAGTCAGACCTATCGTATGGTCTACAAGATAACCCCTATAGCTCTACGGTATATAAAATCTAGTTTTGTCTTTGATCTTCTTGGATGTATGCCTTGGGACCTCATTTATAAGGCTTGTGGTAGAAGGGAGGAAGTGAGGTATCTATTATGGATCAGATTATACAGAGTACGCAAAGTCAGAGATTTTTTCCAGAAGCTGGAAAAGGATATACGAATCAATTACATGTTTGCAAGAATAGTGAGACTTCTGGCAGTTGAACTGTACTGCACTCATATAGCTGCATGTATCTTCTACTATTTGGCTACCACACTACCTCCTTCCCAAGAAGGCTACACGTGGATAGGAAGTCTAAAGATGGGTGACTTTAGTTATTCAGATTTCAGAAATATTGATCTTTGGAAGCGTTACACAACATCATTATATTTCTCTATTCTCACCATGTCTACTGTTGGGTATGGAGATATACATGCTGTGAATATGAGGGAGATGATATTCGTGATGATATATGTTTCATTTGACATGGTCATTGGTGCTTATTTGATTGGTAACATCACAGCATTGATAGTCAGAGGATCAAAGACTGAAAAATTTAGGGAAAAAATGAAGGATCTAATGACATTTATGAACAGAAATAGGTTAGAAAGGGACATCCGTGAACAGATAAAAGGCCATGTGTGCTTACAGTATGAGAGTAGCTATGCTGAGGCAGCTGTGGTTCAGGAACTACCAATTTCTATTCGTGCAAAGATATCCCAGACATTATATTTGCCATACATTGAAAAGGTTTCTCTTTTTAAGGGTTGCTCTTCAGAATTTATCAGTCAGATTGTTATTAGGCTCCATGAGGAATTCTTTCTCCCAGGAGAAGTGATAATGGAATACGGAAGTGTTGTAGACCAATTATACTTTGTCTGTCATGGTTTGCTGGAGGAAGTAGGGACAGGTGAAGATGGGTCTGAAAAGACTGTTTCCCTTCTACAACCTTACAGTGTATTTGGACAAGTTTCTGTTCTTTGTAACATACCTCAGCCATATACTGTCCGGGGGAAAGAATCTTTTAATGATAAGCAATTGGGGTCAGACATCTCATTACATATTGGGAAGCAAGAAGCTGAACTTGCTTTGAAGGTCAATAGTGCGGCTTTCCAAGGAGACTTGTACCATCTAAAAGCATCCAAAGGACATGAAGACATCGCACAGTTCCTTATTCAGGAAGGTGTAGACGTCAATATTAAAGATAACTTTGGGAACACACCATTACTTGAAGCTGTTAAGAATGGACATGATCAGGTTGCTTCCTTACTCTTTAAGGAAGGGGCCTTAATGGGGATAGACAATGCAGCAACTTTTCTATGTACAATTGTTGCAAGGGGTGATTCAGATTATGTTAAAAGGCTATTATCTAATGGAATGGATCCAAACTTGAAAGATTATGATCACAGAAGTCCTCTGCATATTGCTGCTGCTGAAGGTTTATACTTCATGGCAAAGTTGCTATTGGAAGCTGGTGCTAGTGTTTTCACCAAAGACAgATGGGGAAATACCCCAATTGATGAAGCCAGAATGTGTGGAAACAAGAATATGATGAAGCTACTAGAAGAGGCAAAATCTGCTCAATTGTTGGAATTCCCAAATCCTTCCACAGAATTTCAAGATAAAGTGCACCAAAAGAAATGCACAGTTTTCCCTTTCCATCCTTGGGATccaaaagaagaaggaagatgtgGTAATGGAATTGTTCTATGGGTTCCTCACAGGATAGAAGAGCTTGTACAAAGAGCAGCAGAGAAGCTAGATTTTTCTACAGATTCTTGTATTCTATCAGAAGATGCTGGTTTAATTACTGATGTGGACATGATCAAGGATGGTCAGAAGCTGcatttagtccttaaaacaCAATAg 2259 0.3798 MILYGCPNPHSLEYIFNKIRRLLDSGKFMSLNFFDRESNRLADALAHYGHSLPLDVSIFDDCPVFCRGIALDDLYSSFFTSMEFGFFRGLPEDLFILDIIGQLAFLVDIVLQFFVAYRDSQTYRMVYKITPIALRYIKSSFVFDLLGCMPWDLIYKACGRREEVRYLLWIRLYRVRKVRDFFQKLEKDIRINYMFARIVRLLAVELYCTHIAACIFYYLATTLPPSQEGYTWIGSLKMGDFSYSDFRNIDLWKRYTTSLYFSILTMSTVGYGDIHAVNMREMIFVMIYVSFDMVIGAYLIGNITALIVRGSKTEKFREKMKDLMTFMNRNRLERDIREQIKGHVCLQYESSYAEAAVVQELPISIRAKISQTLYLPYIEKVSLFKGCSSEFISQIVIRLHEEFFLPGEVIMEYGSVVDQLYFVCHGLLEEVGTGEDGSEKTVSLLQPYSVFGQVSVLCNIPQPYTVRGKESFNDKQLGSDISLHIGKQEAELALKVNSAAFQGDLYHLKASKGHEDIAQFLIQEGVDVNIKDNFGNTPLLEAVKNGHDQVASLLFKEGALMGIDNAATFLCTIVARGDSDYVKRLLSNGMDPNLKDYDHRSPLHIAAAEGLYFMAKLLLEAGASVFTKDRWGNTPIDEARMCGNKNMMKLLEEAKSAQLLEFPNPSTEFQDKVHQKKCTVFPFHPWDPKEEGRCGNGIVLWVPHRIEELVQRAAEKLDFSTDSCILSEDAGLITDVDMIKDGQKLHLVLKTQ 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1696 752 Gene3D - 566 661 IPR036770 -
Sto5g1696 752 PANTHER POTASSIUM CHANNEL AKT1 70 470 IPR045319 GO:0005249|GO:0006813
Sto5g1696 752 PANTHER POTASSIUM CHANNEL AKT1 507 751 IPR045319 GO:0005249|GO:0006813
Sto5g1696 752 PANTHER POTASSIUM CHANNEL AKT1 472 510 IPR045319 GO:0005249|GO:0006813
Sto5g1696 752 ProSiteProfiles Ankyrin repeat region circular profile. 598 630 - -
Sto5g1696 752 SMART cnmp_10 383 501 IPR000595 -
Sto5g1696 752 SMART ANK_2a 501 530 IPR002110 GO:0005515
Sto5g1696 752 SMART ANK_2a 598 627 IPR002110 GO:0005515
Sto5g1696 752 SMART ANK_2a 631 660 IPR002110 GO:0005515
Sto5g1696 752 SMART ANK_2a 534 563 IPR002110 GO:0005515
Sto5g1696 752 SMART ANK_2a 565 594 IPR002110 GO:0005515
Sto5g1696 752 Pfam KHA, dimerisation domain of potassium ion channel 676 746 IPR021789 -
Sto5g1696 752 ProSiteProfiles Ankyrin repeat profile. 506 533 IPR002110 GO:0005515
Sto5g1696 752 ProSiteProfiles Ankyrin repeat region circular profile. 534 559 - -
Sto5g1696 752 Gene3D Helix hairpin bin 310 366 - -
Sto5g1696 752 SUPERFAMILY Voltage-gated potassium channels 62 308 - -
Sto5g1696 752 ProSiteProfiles KHA domain profile. 677 752 IPR021789 -
Sto5g1696 752 SUPERFAMILY Ankyrin repeat 507 654 IPR036770 -
Sto5g1696 752 SUPERFAMILY cAMP-binding domain-like 311 468 IPR018490 -
Sto5g1696 752 CDD CAP_ED 383 470 IPR000595 -
Sto5g1696 752 Pfam Cyclic nucleotide-binding domain 403 468 IPR000595 -
Sto5g1696 752 Pfam Ankyrin repeats (many copies) 505 554 IPR002110 GO:0005515
Sto5g1696 752 Pfam Ion transport protein 74 308 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto5g1696 752 Gene3D - 74 308 - -
Sto5g1696 752 ProSiteProfiles Ankyrin repeat profile. 598 630 IPR002110 GO:0005515
Sto5g1696 752 Gene3D Jelly Rolls 367 473 IPR014710 -
Sto5g1696 752 ProSiteProfiles Ankyrin repeat region circular profile. 506 533 - -
Sto5g1696 752 ProSiteProfiles Ankyrin repeat profile. 534 566 IPR002110 GO:0005515
Sto5g1696 752 Pfam Ankyrin repeats (3 copies) 574 652 IPR002110 GO:0005515
Sto5g1696 752 PRINTS EAG/ELK/ERG potassium channel family signature 98 108 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g1696 752 PRINTS EAG/ELK/ERG potassium channel family signature 207 217 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g1696 752 PRINTS EAG/ELK/ERG potassium channel family signature 255 272 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g1696 752 PRINTS EAG/ELK/ERG potassium channel family signature 299 308 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g1696 752 Gene3D - 488 565 IPR036770 -
Sto5g1696 752 PANTHER POTASSIUM CHANNEL SKOR-LIKE 70 470 - -
Sto5g1696 752 PANTHER POTASSIUM CHANNEL SKOR-LIKE 507 751 - -
Sto5g1696 752 PANTHER POTASSIUM CHANNEL SKOR-LIKE 472 510 - -
Sto5g1696 752 ProSiteProfiles cAMP/cGMP binding motif profile. 383 467 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1696 Sto-Chr5 12146927 12155576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1696 74 630 Ion Channels AT5G37500 63.009 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1696 K21867 - gmx:100814385 1127.46