Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1672 ATGGGAAGGCAACCATGCTGTGACAAAGTGGGGTTGAAGAAGGGGCCATGGACAGCTGACGAAGACAAGAAGCTCATAAGCTTCATCCTCTCCAAAGGCCAATGTTGCTGGAGAGCTGTTCCTAAGCTTGcagGGCTTTTGAGGTGTGGGAAAAGCTGTAGATTAAGATGGACCAACTATCTCAGACCTGATTTAAAGAGAGGCCTCCTTTCGGattatgaagagaaaatggtcaTCAACCTCCATGCTCAACTTGGCAACAGAACTGACAATGAGATCAAGAACCATTGGAATACCCACATCAAGAAGAAGCTCAGGAAAATGGGAATCGATCCAAACACACACACCCCTCTCTCTCCTAATCTCAAGATTGAACCTCAATTTCATCACCAAGCACCATCATCAACCttaactgaatcaaacccaatCAAAActgaaacgacgtcgtttgactCAGTGGACCACACCATCAACAATACTGCCTTCTCCACAGATGAAGTCCCAATAGTAGAACCTCATGAGATTCTagaaccttcttcttcttcttcttcatcatcatcattatcatctccAAATTCATCATCCAATTTTCTCCAAGACCTGCATCTTCCAGACTTTGAGTGGTCTTTACTATCCAAGAATGGTCATGGATCATGA 657 0.3744 MGRQPCCDKVGLKKGPWTADEDKKLISFILSKGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSDYEEKMVINLHAQLGNRTDNEIKNHWNTHIKKKLRKMGIDPNTHTPLSPNLKIEPQFHHQAPSSTLTESNPIKTETTSFDSVDHTINNTAFSTDEVPIVEPHEILEPSSSSSSSSSLSSPNSSSNFLQDLHLPDFEWSLLSKNGHGS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1672 218 Gene3D - 71 126 - -
Sto5g1672 218 SUPERFAMILY Homeodomain-like 14 102 IPR009057 -
Sto5g1672 218 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Sto5g1672 218 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sto5g1672 218 CDD SANT 16 61 IPR001005 -
Sto5g1672 218 MobiDBLite consensus disorder prediction 176 196 - -
Sto5g1672 218 Gene3D - 11 67 - -
Sto5g1672 218 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 210 - -
Sto5g1672 218 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sto5g1672 218 SMART sant 13 63 IPR001005 -
Sto5g1672 218 SMART sant 66 103 IPR001005 -
Sto5g1672 218 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 105 IPR017930 -
Sto5g1672 218 PANTHER MYB TRANSCRIPTION FACTOR-RELATED 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1672 Sto-Chr5 11867311 11868388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1672 1 209 MYB Transcription Factor Family AT1G66230 57.265 1.44e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto5g1672 Myb_DNA-binding 5.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1672 K09422 - tcc:18601838 282.337