Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1652 ATGAAGAGGGATAACCGAGAAGCCTTTGCTGGTGTTGGCTCTGGATCTGGATTCAGAGCCGTAGGAGTAAATGGGAGTAATGATACTAATAATAATGGTGTTTCAGGTTCTGAATGCTCGTCAATGTCAAGTGGGAAGGCGAAGATGTGGGAGGAGGGAGAAGAACACGATGAGTTGCTTGAGGCTTTGGGCTACAAGGAAGATGGGATTTCTCATCTCGCTTCTGACACCGTCCACTACGATCCCACAGATCTCCATGGATGGGTTCAGAGCATGCTCACAGAACTCAATACTTCACCCTCTTGTCTGGATCCATCGGCTCTATTAGCCAACCAGCAAATCGATTACCCGATTCTCGCATCCGCCCCAAATTTCTCGAATCCTCAGCATCAGATCGAGAATCCATCGCAGGTTTACAACGACGACTCGGAGTACGATCTCAGAGCGATTCCAGGCATGGCCGCGTATCCACAAAGAGAAACCAGCACTAGCAACAAGAGATTGAAAATCTCACCAATCGAATCGGCTTCCCCGTCGCCGCCGATTGCGACAGAGCAGGCGCGGTCGGTGGTTCTCGTCGATTCCCAAGAAAATGGTGTGCGTCTCGTGCACACGCTCATGGCGTGTGCAGAGGCAGTTCAACAGAACAATTTGAAGCTAGCAGACGCGCTCGTGAAGCACGTGGGTTTCCTCGCGACGTCTCAAGCAGGAGCTATGAGGAAGGTAGCCTCCTATTTCGCGCAAGCTCTAGCTCGTCGGATTTACGGGATCTACCCTCAAGAAGCCCTAGATTCTTGCTTCTCCGATATGCTCCAAATGCATTTCTACGAGTCCTGCCCTTACCTGAAATTCGCACATTTCACCGCCAACCAAGCCATCCTCGAGGCCTTCGCCGGCGCTAACAGAGTCCACGTCATCGATTTCGGGCTCAAGCAGGGGATGCAATGGCCGGCGTTAATGCAGGCCCTCGCATTACGTCCCGGCGGTCCTCCGACCTTCCGATTAACCGGAATCGGACCTCCGCAGCCGGACGACAGCGACGCTCTGCAACAAGTCGGCTGGAAACTCGCGCAGTTGGCCAAAACAATCGGCGTCCAATTCGAATTCCGCGGCTTCGTCTGCTCCAGTTTGGCGGATCTCGAACCCTCACTGATCGATATCCGACCCGGCGAAGCCGTGGCGATATGCAACGTCGTGGCGTGCGAAGGGTCAGACCGAGTGGAAAGGCACGAGACGCTGAGCCAGTGGAGAAGCAGGATGGGGTCGGCCGGGTTCGACCCGGTTCATCTGGGTTCGAACGCTTTCAAGCAAGCGAGCATGTTATTGGCGGTGTTCGCCGGCGGAGATGGGTACAGGGTGGAGGAGAATAATGGGTGCCTCATGCTTGGATGGCACACTCGGCCCCTCATAGCCACATCGGCGTGGAAAATTCCGGCCAGTGACGGCGGCGATATGTAG 1458 0.5473 MKRDNREAFAGVGSGSGFRAVGVNGSNDTNNNGVSGSECSSMSSGKAKMWEEGEEHDELLEALGYKEDGISHLASDTVHYDPTDLHGWVQSMLTELNTSPSCLDPSALLANQQIDYPILASAPNFSNPQHQIENPSQVYNDDSEYDLRAIPGMAAYPQRETSTSNKRLKISPIESASPSPPIATEQARSVVLVDSQENGVRLVHTLMACAEAVQQNNLKLADALVKHVGFLATSQAGAMRKVASYFAQALARRIYGIYPQEALDSCFSDMLQMHFYESCPYLKFAHFTANQAILEAFAGANRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDDSDALQQVGWKLAQLAKTIGVQFEFRGFVCSSLADLEPSLIDIRPGEAVAICNVVACEGSDRVERHETLSQWRSRMGSAGFDPVHLGSNAFKQASMLLAVFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKIPASDGGDM 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1652 485 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 395 476 IPR005202 -
Sto5g1652 485 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 58 395 IPR005202 -
Sto5g1652 485 Pfam Transcriptional regulator DELLA protein N terminal 65 100 IPR021914 -
Sto5g1652 485 ProSiteProfiles GRAS family profile. 193 476 IPR005202 -
Sto5g1652 485 PANTHER DELLA PROTEIN RGL1 395 476 IPR030006 GO:0003712|GO:0005634
Sto5g1652 485 PANTHER DELLA PROTEIN RGL1 58 395 IPR030006 GO:0003712|GO:0005634
Sto5g1652 485 MobiDBLite consensus disorder prediction 1 54 - -
Sto5g1652 485 MobiDBLite consensus disorder prediction 20 44 - -
Sto5g1652 485 Gene3D - 55 96 IPR038088 -
Sto5g1652 485 Pfam GRAS domain family 202 395 IPR005202 -
Sto5g1652 485 SMART DELLA_2 57 106 - -
Sto5g1652 485 MobiDBLite consensus disorder prediction 158 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1652 Sto-Chr5 11726880 11728673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1652 395 477 GRAS Transcription Factor Family AT2G01570 80.723 7.87e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto5g1652 GRAS 2.7e-68 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1652 K14494 - gmx:547719 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1652 5 11726880 11728673 Sto5g1652 5 11726880 11728673 CCT