Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1650 ATGGAGCACTTGATGGGTCTTCTCAGAATTCACGTCCAGAGAGGGGTGAATCTTGCAATCAGAGACGTCGTAAGCAGCGACCCTTACGTTGTCATCAAAATGGGCAAGCAGGTGaatccattcattcattcagTTTTCATTAAATTGAAGACTCGAGTGGTGAAGCAGAATATCAATCCTGAGTGGAATGATGATTTGACCTTATCTATTTCAGATCCTCGCCTTCCTGTCCATCTTTTGGTGTACGACAAGGACCGATTCAGTTTGGATGACAAAATGGGGGAGGCTGAGTTTGACATTAGTCCATTCCTTGAGGCCGTGAAGATGCGGCTAGAAGGTCTGCCGGACGGCACAATAGTGACGAGAATACAACCTAGCCGGCAAAATTGTCTAGCCGAAGAGAGCCAAATTGTGTGGAAAGATGGGAAAGTTGTGCAGAACTTATTTCTTAGGCTAAGGAATGTGGAGTCTGGGGAAGTGGAGCTTCAATTGCAATGGATTGACATTCCTGGTTCAAGGGGTCTGTAG 528 0.447 MEHLMGLLRIHVQRGVNLAIRDVVSSDPYVVIKMGKQVNPFIHSVFIKLKTRVVKQNINPEWNDDLTLSISDPRLPVHLLVYDKDRFSLDDKMGEAEFDISPFLEAVKMRLEGLPDGTIVTRIQPSRQNCLAEESQIVWKDGKVVQNLFLRLRNVESGEVELQLQWIDIPGSRGL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1650 175 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 174 - -
Sto5g1650 175 SMART C2_3c 7 112 IPR000008 -
Sto5g1650 175 Pfam C2 domain 6 103 IPR000008 -
Sto5g1650 175 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Sto5g1650 175 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 174 IPR044562 -
Sto5g1650 175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 168 IPR035892 -
Sto5g1650 175 CDD C2_ArfGAP 6 158 - -
Sto5g1650 175 Gene3D C2 domain 2 173 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1650 Sto-Chr5 11691025 11692999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1650 47 175 C2H2 Transcription Factor Family AT1G70790 59.542 5.15e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1650 - - mnt:21409836 276.174