Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1634 ATGGCCAAAACACGCCTTATTGAACCACCAATCCGATACGGCAATAAAAAATTCCGCATATATACTATCACACCGACGACGACGGCGACGACGGCGACGGCGGATCAAGCACTTCCAAAGCAAGTAAAGGCAGATAGACGTGTTTCTCAGTTTCTGCAGGGACGACGGCCACACTTGGAAGGAACTACTTTACTGTTTTTCTTTCTGCTGCTCTACGAAGAGAAAGAAGCCGTTAATAAGATAGTTGAAGAGGCATTAATCATATTGTTTCGTAAGTACATACGCGTTCCTAGTGAAAACTTAGTTGGGATAGATTCTCGTGTCAAAGAAATAGAGAAGGCTCTGGATATAGGGTCAGATGATGATGTTGTTAGAGTTGTGGGCATTTGTGGAATGGCTGGAATAGGGAAGACCACTCTTGCTTCACTTGTGTATAGCAAGATCTTCCATCTTTTCGAATCCTGTTGTTTCCTTGACATTAATTTAAGTTCTGAATTCACAAAAGATCTAGTCTGTCTACAGAAACAACTTCTTCATGCAACTTTGAAGCAGAAATATCTTGACATACAGACGAATGAAGCTCTTACACTTTTCTGCAGGATTGCTTTCAGGTGTGATTATCCTGCAAGAGATTTTGAGGAGGTGACTTATAGTGTACTAGAATATGCTAAAGGTCTTCCATTAGCTATTCAATCACTAGCTTCATTCTTACTAGAACGAAGTGTCTCCAAATGTGGTCATAAAACAGAAAGTGTCTCCAAATGGAAGAGTGCCTTGGCTGAACCCCAAAAATTTCATCACCTTTCAATAGGAAAGATGCTTATACAGCCAAACAATGAGTTTATTTATATTAGCTGTCTTGTCTACTTGACTCCATCTTGTACTCAGAAATGCTGTATATATCCTGTATTGGAAATCGGAATAgtgttGGCAAAAGTTATTGATGAAATCGTTGAAGAGGCATTAAGCATATTACTTCGTAAGTACATACGTATTCCTGGTGATAACTTGGTTGGCATAGATTCTCGTGTAAAAGAAATAGAGAAGGCTCTGGATATAGGTTCAGATGATGTTGTTAGAGTTGTGGGCATTTGTGGTATGGCTGGAATAGGAAAGACTACTCTTGCTTCACTTGTGTATACCAACATCTTCCATCTCTTTGAAGCCTCTTGTTTCCTTAACATTTTAGGTAGTAGTGAAGTCAGTGTCACAAGTAATCTAATCTGCCTACAGAAACAACTTCTTCGTGCAACTTCGAGGCAGCAGGAAGATCTAGAGATAGGGACGACTCTCCCCAGGTTGAGAAGCATTGATCTAAGTGGCTCCAAGAATCTAATAAAGACTCCAAATTTTAAAGGACTCCCTAAACTTGAAAGGCTAAGTTTTGAAGGATGTATAAAATTATTGGAGCTTGATCCATCTATTGCAAGCCTTCCTAAGCTTACATTCTTGAATTTGAGAAACTGCACAAGTCTGGTCAATATCCCAAATACCTTATTTGCTCTAACTTCActtcaaactctaaacctagcTGGATGCTCTAAACTTGCTGAATGTTTGAACTTCCATTCTGTTTGGAGCTCTGTAGAAGTGAAATCAAAATTGCTTTTCATTGCTTTAGCCGCTTTATTTGTAATGACCGTTGGTAATTACAGCCAAACAATGAGTTTATTTATATTAGCTATCTTATCTTCGTGA 1698 0.384 MAKTRLIEPPIRYGNKKFRIYTITPTTTATTATADQALPKQVKADRRVSQFLQGRRPHLEGTTLLFFFLLLYEEKEAVNKIVEEALIILFRKYIRVPSENLVGIDSRVKEIEKALDIGSDDDVVRVVGICGMAGIGKTTLASLVYSKIFHLFESCCFLDINLSSEFTKDLVCLQKQLLHATLKQKYLDIQTNEALTLFCRIAFRCDYPARDFEEVTYSVLEYAKGLPLAIQSLASFLLERSVSKCGHKTESVSKWKSALAEPQKFHHLSIGKMLIQPNNEFIYISCLVYLTPSCTQKCCIYPVLEIGIVLAKVIDEIVEEALSILLRKYIRIPGDNLVGIDSRVKEIEKALDIGSDDVVRVVGICGMAGIGKTTLASLVYTNIFHLFEASCFLNILGSSEVSVTSNLICLQKQLLRATSRQQEDLEIGTTLPRLRSIDLSGSKNLIKTPNFKGLPKLERLSFEGCIKLLELDPSIASLPKLTFLNLRNCTSLVNIPNTLFALTSLQTLNLAGCSKLAECLNFHSVWSSVEVKSKLLFIALAALFVMTVGNYSQTMSLFILAILSS 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1634 565 PRINTS Disease resistance protein signature 126 141 - -
Sto5g1634 565 PRINTS Disease resistance protein signature 500 516 - -
Sto5g1634 565 Gene3D Ribonuclease Inhibitor 446 535 IPR032675 -
Sto5g1634 565 PANTHER TMV RESISTANCE PROTEIN N-LIKE 309 425 - -
Sto5g1634 565 PANTHER TMV RESISTANCE PROTEIN N-LIKE 70 186 - -
Sto5g1634 565 PANTHER TMV RESISTANCE PROTEIN N-LIKE 438 524 - -
Sto5g1634 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 320 469 IPR027417 -
Sto5g1634 565 SUPERFAMILY L domain-like 425 519 - -
Sto5g1634 565 Pfam NB-ARC domain 107 168 IPR002182 GO:0043531
Sto5g1634 565 Pfam NB-ARC domain 343 430 IPR002182 GO:0043531
Sto5g1634 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 244 IPR027417 -
Sto5g1634 565 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 438 524 IPR044974 GO:0006952
Sto5g1634 565 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 70 186 IPR044974 GO:0006952
Sto5g1634 565 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 309 425 IPR044974 GO:0006952
Sto5g1634 565 Gene3D - 89 203 IPR027417 -
Sto5g1634 565 Gene3D - 326 445 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1634 Sto-Chr5 11507521 11516470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1634 429 530 WRKY Transcription Factor Family AT4G12020 43.137 1.14e-10 62.8