Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1628 ATGGTGTTGAAGAAGAGGCTAAATTATGGATTCAACGGCTTTCAAGTTCCCTTTATACCTAGAGCTCCTAGATCTGTAAGAAGGAGGGGTCTTCCCAAGAAAGCTGATGAAGATGGTGATGTTTGCGCAATTGAACTACTGGCATCTTTAGCTGGAAAATTGTTGCAGGAGGGTGAAAGTTCTGCTTGTAGCAATGCATCGGATGGAAATCATCAGTCAGCCTTTGGCCAAGGTGTTGTTGAACAGGAAAGTCAAGGTGAAGCTAAACCATTACTAACAGAAGGTGTTCATCATGGAAGTTGTGCTGAGAGTACCTTCGTTACTGAGGCAATCTCACAAAATAGTAGTCATAAGTATGTATCGCAAGCTGAGACTGATGGTGTATTAGAACGCACTTCAGTTACTAATCATGTTGACTGCTATGGGAAAACCGAACCTGACATTAAGCCAGAAATTTGCAAATGGGAGGATAAAGTTGGACATTGTTCTAGTAGGTTAGCAGAGGCGCCCCAAAATTTTAGGGAGTCTTGTAATAATGGTAATATAATAAATCTTTTTAAGCAGGAACAAGAAGCTGGGAATTCAGGCATTGAGGGATCAAGTTTAGCTGGTAAATGTAGTTTGAAGGATCCAGTTGAATTGTGTGTTAACTCTCCTGCAGTAATTAACTCAGATAGTAAAGTTAAATCTCCATTCTGTAAAGGAACTTTTCCCAATGGTTCCTTTTCTATGTATCACAGTGATAGTAAGTTAGGTTTTAGAGATGATGACGAAAACTTTATAAGGTGCAACAAAATCAGCACCAAGTTGAAGGCTTCCAGGCCTCCACATCAAATTGCACATCGACGAATCAGGAAGCTCCTAACTTCCAAATACTGGAAGGTTGCTCCGAAGTTGAAGGATTGTGAACTTTCTAGATCTGATGTGGGAGCAAAACCTTCTTATCACAAGAGGAAGACTTGTCACAGTTTTGAAAGAGGTCATCATGACACTCTTTTcaagaggaggaaattctttaACAGGGGTTCAGGTCTGTCTGCTGATggagggtttagcagtgggagTGTATCTAATTCACTTAAGAAAGGAATGGATGGAGAAAACCCTAGCTTGTCTTCAAAACAGCATGTATCGAAGGATTCTcatgTGAAATTTAGCATTAAATCATTCAAGATACCAGAGCTTTATATTGAGGTTCCTGAAACTGCAACTGTTGGTTCACTAAAGAGGAGAGTCATGGAGGCAGTGATGGCTATTCTTGGAGGTGGAGTGCATGTTGGTGTTCTTTTTGAGGGGAAAAAAGTTAGAGATGACGACAGAACGCTTCAGCAAACTGGTTTATCTTGCGAAGAAAATATTGATAACCTTGGTTTCACATTGGAGCCCAGTTCTTTCCAAGCTTCTCCATCTATATATGTTGGTGATCCTTCTGCTCATTACGAAACATCCCAGTCAACTAGGTCCCCTGGAACTCCTGTCTTAGATTCAGGAATTACTAATGTCATCCGTGACTCGCCCATGCTGACTAATACAGGCAACCTTATTGAAAGTAACCATGAATCAATTTCTTCCCCCGCTGACACCAAGAATGACAATATAACACCAGATTCCAGAGCTCTAGTTGCAGCTCCACCTAGGAGCACAGAACCTTTGGCCATGGTTCCTGTGAATCAGAAAACTAGGCGCTCTGAGCTTGTACAGCGTCGAACGAGAAGACCCTTCTCTGTCTCTGAGGTAGAAGCCCTTGTTAAGGCCGTTGAGGAACTCGGAACTGGAAGGTGGCGTGATGTTAAGTTGCTTGCCTTTGAGAATGCGGACCATAGGACTTATGTAGACTTGAAGGATAAATGGAAAACACTAGTGCACACAGCAAAAATCTCACCTCAACAAAGGAGGGGAGAGCCAGTGCCTCAGGAGTTATTGGACAGAGTGTTGGGTGCTCATGCTTTCTGGTCACAGCAGCAAAATGTTGTGAAGCATCAAGCTGCAACTATGAAGATGATTAAAGAAGCGTCCTCCTCAGATCTTGGTGATGGTGAAGCTATCATCCAACCAGTTGTTATGTAA 2067 0.4132 MVLKKRLNYGFNGFQVPFIPRAPRSVRRRGLPKKADEDGDVCAIELLASLAGKLLQEGESSACSNASDGNHQSAFGQGVVEQESQGEAKPLLTEGVHHGSCAESTFVTEAISQNSSHKYVSQAETDGVLERTSVTNHVDCYGKTEPDIKPEICKWEDKVGHCSSRLAEAPQNFRESCNNGNIINLFKQEQEAGNSGIEGSSLAGKCSLKDPVELCVNSPAVINSDSKVKSPFCKGTFPNGSFSMYHSDSKLGFRDDDENFIRCNKISTKLKASRPPHQIAHRRIRKLLTSKYWKVAPKLKDCELSRSDVGAKPSYHKRKTCHSFERGHHDTLFKRRKFFNRGSGLSADGGFSSGSVSNSLKKGMDGENPSLSSKQHVSKDSHVKFSIKSFKIPELYIEVPETATVGSLKRRVMEAVMAILGGGVHVGVLFEGKKVRDDDRTLQQTGLSCEENIDNLGFTLEPSSFQASPSIYVGDPSAHYETSQSTRSPGTPVLDSGITNVIRDSPMLTNTGNLIESNHESISSPADTKNDNITPDSRALVAAPPRSTEPLAMVPVNQKTRRSELVQRRTRRPFSVSEVEALVKAVEELGTGRWRDVKLLAFENADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLDRVLGAHAFWSQQQNVVKHQAATMKMIKEASSSDLGDGEAIIQPVVM 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1628 688 Gene3D - 559 663 - -
Sto5g1628 688 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 669 IPR031105 -
Sto5g1628 688 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 669 - -
Sto5g1628 688 MobiDBLite consensus disorder prediction 356 375 - -
Sto5g1628 688 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 567 625 IPR017930 -
Sto5g1628 688 SUPERFAMILY Ubiquitin-like 379 458 IPR029071 -
Sto5g1628 688 SMART sant 570 623 IPR001005 -
Sto5g1628 688 CDD SANT_TRF 572 622 - -
Sto5g1628 688 ProSiteProfiles Myb-like domain profile. 566 621 IPR001005 -
Sto5g1628 688 SUPERFAMILY Homeodomain-like 572 653 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1628 Sto-Chr5 11455882 11459001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1628 - - gmx:100795471 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0628 6 6625769 6629433 Sto5g1628 5 11455882 11459001 ECH
Sto12g0150 12 930190 933316 Sto5g1628 5 11455882 11459001 ECH
Sto5g1628 5 11455882 11459001 Sto5g1628 5 11455882 11459001 ECH