Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1619 ATGGCTTCATCAAGATCTAACACAGGAAATACATGTTCTTCAATATGGACTGTGAAGCAAAATAAGATATTTGAAAATGCACTTGCTTTGattgaggaagaaagaaaagatcGTTGGCAAGTAATAGCTAGAATGGTTGGTGATAAAACTTCTGAAGAAGTTGAAAATCATTATCAAATTCTTCTAGAAGACTTGGCTAATATTGAGTCTGGCTATGTTAGTGATCCTTATTATCAGAATTAA 243 0.2963 MASSRSNTGNTCSSIWTVKQNKIFENALALIEEERKDRWQVIARMVGDKTSEEVENHYQILLEDLANIESGYVSDPYYQN 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1619 80 SMART sant 12 64 IPR001005 -
Sto5g1619 80 PANTHER PROTEIN RADIALIS-LIKE 3 1 79 - -
Sto5g1619 80 SUPERFAMILY Homeodomain-like 14 71 IPR009057 -
Sto5g1619 80 Pfam Myb-like DNA-binding domain 16 59 IPR001005 -
Sto5g1619 80 CDD SANT 16 62 IPR001005 -
Sto5g1619 80 Gene3D - 9 74 - -
Sto5g1619 80 ProSiteProfiles Myb-like domain profile. 16 62 IPR001005 -
Sto5g1619 80 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 79 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1619 Sto-Chr5 11332378 11332620 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto5g1619 Myb_DNA-binding 2.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1619 - - thj:104801924 92.8189