Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1603 ATGGACGGCCCAGATTGCATCTTCCTATTCAATCCTTCGACGTCATACCAACTGTATGTGTCGGATCTTGCCCGTGACGGTGACGGGCAGCCTGCCCGTGATGAAGTGTGGCCCCCAGGTGTGGCTCAGAAATCTGTTAGTAGTAATTTGGTAATTTCTGAAATGGCTGGGATTTGCTGTGGTGTTGTTGGGGAAGGAGAGACGCCGACTCCGATGGAGCCGAGCCGACCTTCCCGTCGTCGTCGATTGGACCTACTGCCCTTGAAGTACATAGCTGACATGGCAGTGCCGCCACCGGAGACCGGCGCGAAGCGCCAAAAGCTGGATCTCTGTACTTCTTCTCCCACACAACCTAGAGATTGCGTAAACGCAGTTGAGAATTGTGAACCTAGCGGTGTTAAAAACGAGGAGGAAAACAATATAGAACCTAAAGGAGACGCAATACTTCAATCCACGATTTCTTTGTTAAATTCGACTGCTACAACAGCGCATGGTAATAATACTAATGAGGCTATTAACGAGTGTCCAAAGTATGGCGTTACATCTGTTTGTGGCAGAAGAAGAGACATGGAAGACGCTGTTTCAGTTCATCCATCGTTCTGCCAAGAAAAAGGGGAAAATCACAAAGAGTTTCACTACTTCGGTGTGTTCGACGGCCATGGCTGCTCTCATGTAGCGACGATCTGTAAGGACAGGTTACACGAGATTGTGAAGGAAAAAGTTGGTGGATCTCGTGAGGATTTGGAATGGAAGTCTACGATGGAACAGAGTTTCGCTCGCATGGACGAGGAGGTGCAGAACTGGAGCCAGACCAACCAGAGCTCCACTTGCAGATGCGAGCTTCAGACTCCTCACTGCGATGCCGTCGGATCTACGGCCGTCGTTACCGTCGTTACGCCGGATAAGATCATCGTCTCAAACTGCGGCGATTCGCGCGCCGTTCTTTGCCGAAACGGCGTCGCCATACCGCTCTCCTCCGATCACAAGCCTGATCGACCCGACGAGTTACTCCGAGTCCAAGCCGCGGGAGGGCGCGTGATATATTGGGATGGTCCAAGAGTTCTCGGAGTGCTTGCAATGTCCAGAGCCATAGGCGACAATTATCTGAAACCTTACGTCATATCAGAGCCGGAAGTGACGGTGACGGACCGGACGGacgacgatgagtgtttgatTCTGGCCAGCGATGGGCTGTGGGACGTGGTATCAAACGACACCGCGTGTGGGGTGGTGCGGATGTGTCTTAAGGTGCAGAATCCGCCGTCGCCGCCGGGATCTCCGGGGACGGATATGGCGGTGTGCTCCGCCGCGGACGGGTCAGACAAGGCGTGCTCCGACGCGTCCATCTTGCTGACGAAGTTGGCGTTGGCGAGGCATAGTACGGACAATGTGAGCGTCGTTGTGGTTGAtttgaggagagagaaagaaaaacaagaatCCAATTCCAACGACGACGATGATAGcaacaataatattattgaatga 1485 0.5091 MDGPDCIFLFNPSTSYQLYVSDLARDGDGQPARDEVWPPGVAQKSVSSNLVISEMAGICCGVVGEGETPTPMEPSRPSRRRRLDLLPLKYIADMAVPPPETGAKRQKLDLCTSSPTQPRDCVNAVENCEPSGVKNEEENNIEPKGDAILQSTISLLNSTATTAHGNNTNEAINECPKYGVTSVCGRRRDMEDAVSVHPSFCQEKGENHKEFHYFGVFDGHGCSHVATICKDRLHEIVKEKVGGSREDLEWKSTMEQSFARMDEEVQNWSQTNQSSTCRCELQTPHCDAVGSTAVVTVVTPDKIIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTDRTDDDECLILASDGLWDVVSNDTACGVVRMCLKVQNPPSPPGSPGTDMAVCSAADGSDKACSDASILLTKLALARHSTDNVSVVVVDLRREKEKQESNSNDDDDSNNNIIE 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1603 494 MobiDBLite consensus disorder prediction 475 494 - -
Sto5g1603 494 ProSiteProfiles PPM-type phosphatase domain profile. 177 471 IPR001932 -
Sto5g1603 494 CDD PP2Cc 177 471 IPR001932 -
Sto5g1603 494 Gene3D - 172 481 IPR036457 -
Sto5g1603 494 SMART PP2C_4 165 469 IPR001932 -
Sto5g1603 494 PANTHER ALPHABET, ISOFORM E-RELATED 78 476 - -
Sto5g1603 494 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 78 476 - -
Sto5g1603 494 SUPERFAMILY PP2C-like 174 472 IPR036457 -
Sto5g1603 494 ProSitePatterns PPM-type phosphatase domain signature. 213 221 IPR000222 GO:0043169
Sto5g1603 494 Pfam Protein phosphatase 2C 177 462 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1603 Sto-Chr5 11233687 11235799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1603 55 481 PP2C-type Phosphatase Gene Family AT3G11410 59.142 1.09e-148 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1603 K14497 - gmx:100776356 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1603 5 11233687 11235799 Sto5g1603 5 11233687 11235799 CCT
Sto5g1603 5 11233687 11235799 Sto5g1603 5 11233687 11235799 ECH