Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1598 ATGAGTGAATTCAAGCCCTTCTCGGAATCGGGGTCGGCCTCGAGTTCGAGGTCAATTAGCGAGACAGTTAATGGGTCTCACCAATTTGTCATAAAGGGGTATTCTTTGGCCAAAGGGATGGGTGCTGGGAGGTATATAATGAGCGACACATTCAGCGTTGGTGGGTACGATTGGGCGATTTATTTCTACCCAGATGGTAAGAACCCAGAGGATAATTCCATGTACGTTTCCGTTTTTATAGCCTTGGCGAGCGAGGGAACCGACGTTAGAGCTTTGTTCAAGTTGACATTGGTCGATCAGAGTGCCAAGGGCAATGATAAAGTGCATAGTCATTTTGATCGCCCGCTGGAGAGTGGACCCTATACATTGAAGTATAGAGGCAGCATGTGTGTCTTAGTGGGGGAAACCTTCTTGGAAATTTGGGGGTTATTGGTTAAAATTGAATCTTTGATTTCCTTTCTACCAGAAATGAGGGGTTACAAACGTTTTTTCAGAAGGACATTATTGGAAACTTCAGAGTACCTGAAAGATGATTGCCTTGTCATGCATTGTACTGTTGGTGTTGTCAAAACACGTTTTGAGGGAGCTAAACAGAGTGTTATTTTACTACGGTCTGACATGGGTCAAGATTTTAAGGGATTGTTAGAATCTGAAGTTGGTTGTGACGTTGTTTTTAAAGTTGGGAATGAAAGCTTCAAAGCTCATAAGCTGATACTTGCTGCCCGATCTCCTGTGTTTAGAGCTCAATTTTTTGGACTTGTTGGAGATCCTAGCATAGATGAGGTGGTGTTAGAGGATATTGAACCCTTTATCTTCAAGGCAATGCTTCTCTTCATTTATACAGACAAACTTCCTGACATCCATGAAGTTATGGGCTCGACACTCATGTGCTCGCAAACTGTCATGGTGCAGCATCTATTGGCTGCTGCTGATCTGTATAATCTTGATCGGCTGAAACTGCTATGTGAATCAAATTTGTGTGAAGAGATTAATACTGACAATGTGGCAACAACACTTGCGCTGGCTGAGCAACATCACTGTCCACAACTTAAGGCCAtctgtttaaaatttgttgcaAATCCTGCAAATCTGGGAGGTACCATCTCAATTGTATATGTGTACTTTGTAATGTTTGATATGACTCAACTTTCATCTCTTCCTGCAGCTACTTCTGAAGCCTTCATGGACTTGAAAGAGAGCTGTCCCTCAATGTTGCTGGAGTTGCTGGAGACATTTGCATCTGCAGAAGAGAATTCAAGCCAACCATTGAGCAGGAAGAGAAGTGGCAGTAGCATATATGGGCAAGATTTAGCTGAGGGAACGGCGGATGAATCGGCTAATCCAAACGGTAGACATGTCAGGAGGCGTACATAG 1374 0.4287 MSEFKPFSESGSASSSRSISETVNGSHQFVIKGYSLAKGMGAGRYIMSDTFSVGGYDWAIYFYPDGKNPEDNSMYVSVFIALASEGTDVRALFKLTLVDQSAKGNDKVHSHFDRPLESGPYTLKYRGSMCVLVGETFLEIWGLLVKIESLISFLPEMRGYKRFFRRTLLETSEYLKDDCLVMHCTVGVVKTRFEGAKQSVILLRSDMGQDFKGLLESEVGCDVVFKVGNESFKAHKLILAARSPVFRAQFFGLVGDPSIDEVVLEDIEPFIFKAMLLFIYTDKLPDIHEVMGSTLMCSQTVMVQHLLAAADLYNLDRLKLLCESNLCEEINTDNVATTLALAEQHHCPQLKAICLKFVANPANLGGTISIVYVYFVMFDMTQLSSLPAATSEAFMDLKESCPSMLLELLETFASAEENSSQPLSRKRSGSSIYGQDLAEGTADESANPNGRHVRRRT 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1598 457 MobiDBLite consensus disorder prediction 417 457 - -
Sto5g1598 457 MobiDBLite consensus disorder prediction 417 435 - -
Sto5g1598 457 CDD MATH 25 186 IPR002083 GO:0005515
Sto5g1598 457 SMART BTB_4 221 330 IPR000210 GO:0005515
Sto5g1598 457 Pfam BTB/POZ domain 211 328 IPR000210 GO:0005515
Sto5g1598 457 Gene3D Potassium Channel Kv1.1; Chain A 198 325 IPR011333 -
Sto5g1598 457 ProSiteProfiles BTB domain profile. 221 284 IPR000210 GO:0005515
Sto5g1598 457 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 11 128 IPR045005 GO:0016567
Sto5g1598 457 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 153 422 IPR045005 GO:0016567
Sto5g1598 457 SUPERFAMILY POZ domain 205 328 IPR011333 -
Sto5g1598 457 ProSiteProfiles MATH/TRAF domain profile. 24 186 IPR002083 GO:0005515
Sto5g1598 457 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 23 191 IPR008974 GO:0005515
Sto5g1598 457 CDD BTB_POZ_BPM_plant 207 327 - -
Sto5g1598 457 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 3 11 128 - -
Sto5g1598 457 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 3 153 422 - -
Sto5g1598 457 SUPERFAMILY TRAF domain-like 21 188 - -
Sto5g1598 457 SMART math_3 29 169 IPR002083 GO:0005515
Sto5g1598 457 Gene3D - 329 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1598 Sto-Chr5 11193610 11199182 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Sto5g1598 BTB 1e-27 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1598 K10523 - gmx:100786636 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1598 5 11193610 11199182 Sto5g1598 5 11193610 11199182 ECH