Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1594 ATGAAGGCGCTGATTCTGGTTGGAGGCTTTGGAACAAGGCTGAGGCCATTGACACTCAGTGTCCCTAAGCCTCTTGTTGATTTTGGTAACAAACCGATGATCCTGCATCAGATAGAGGCTCTTAAGGCTATTGGAGTCAGTGAAGTGGTACTAGCTATCAATTACCAACCAGAGGTAAGAATCGTGATGTTGAATTTCTTGAAGGATTTTGAGGCTAAGCTGGGCATCAAGATCACATGTTCTCAAGAAACTGAGCCACTGGGGACCGCAGGTCCTCTGGCTCTTGCCAGAGACAAGCTGATAGATGACTCTGGAGAGCCATTTTTTGTTCTCAACAGTGATGTCATCAGTGAGTATCCACTTAAAGAGATGATTGAATTCCATAAATCCCATGGAGGAGAGGCTTCCATAATGGTGACAAAGGTCGATGAGCCATCAAAATATGGTGTGGTTATCATGGAAGAGACTACAGGGAAGGTTGAGAGATTTGTCGAAAAACCTAAGCTGTTTGTTGGTAACAAAATCAATGCTGGAATCTACTTGTTGAACCCCTCAGTTTTGGATCGAATTCAACTAAGGCCCACTTCTATTGAGAAAGAGGTGTTTCCAAAGATAGCAGCAGAGGAAAAGCTATATGCAATGGTCCTCCCTGGATTTTGGATGGACATAGGGCAACCAAGGGACTATATTACTGGCCTGAGACTCTACCTTGACTCACTGAGGAAGAAGTCTTCTTCTAAGCTAGCCAAAGGCTCTCACTTTGTGGGGAATGTCATAGTGGACGAGACTGCTAAGATTGGCGAAGGCTGTCTTATTGGACCTGATGTCGCAATTGGTCCTGGCTGTATAGTTGAGTCAGGTGTTCGTCTCTCACGCTGCACCGTAATGCGAGGAGTCCGGATTAAGAAACACGCTTGCGTATCCAGCAGTATCATCGGGTGGCATTCCACTGTAGGGCAATGGGCTCGTGTGGAGAACATGACTATTCTTGGAGAAGATGTTCATGTGTGTGATGAAATATACAGCAATGGTGGTGTGGTTCTGCCCCACAAGGAGATCAAGTCCAGCATTTTGAAGCCAGAGATAGTCATGTGA 1095 0.4566 MKALILVGGFGTRLRPLTLSVPKPLVDFGNKPMILHQIEALKAIGVSEVVLAINYQPEVRIVMLNFLKDFEAKLGIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKEMIEFHKSHGGEASIMVTKVDEPSKYGVVIMEETTGKVERFVEKPKLFVGNKINAGIYLLNPSVLDRIQLRPTSIEKEVFPKIAAEEKLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSSKLAKGSHFVGNVIVDETAKIGEGCLIGPDVAIGPGCIVESGVRLSRCTVMRGVRIKKHACVSSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1594 364 Gene3D Hexapeptide repeat proteins 238 359 - -
Sto5g1594 364 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 364 - -
Sto5g1594 364 CDD M1P_guanylylT_B_like_N 1 237 IPR045233 GO:0004475|GO:0005525|GO:0009298
Sto5g1594 364 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 1 364 - -
Sto5g1594 364 Pfam Bacterial transferase hexapeptide (six repeats) 264 298 IPR001451 -
Sto5g1594 364 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 236 IPR029044 -
Sto5g1594 364 Pfam Nucleotidyl transferase 2 232 IPR005835 GO:0009058|GO:0016779
Sto5g1594 364 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 315 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1594 Sto-Chr5 11159868 11161425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1594 1 150 Eukaryotic Initiation Factors Gene Family AT4G18300 23.899 5.19e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1594 K00966 - csin:114268393 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1594 5 11159868 11161425 Sto5g1594 5 11159868 11161425 CCT
Sto5g1594 5 11159868 11161425 Sto5g1594 5 11159868 11161425 ECH