Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1589 ATGTCCACACAAGGGCAGGGAGGGATTGACCTAGCGTTGCTGGATGATATAATCAAACGGCTCACAGAAGTCCGATTAGCCAGACCTGGGAAGCAGGTTCAGCTCTCCGAGTCCGAGATCAAGCAGCTCTGTGTTGCCGCCAGAGACATTTTTCTTCAGCAGCCCGTTTTGCTCGAGCTCGAAGCTCCCATCAAGATTTGCGGTGACGTCCATGGGCAGTACAGTGACTTGTTAAGGCTCTTTGAGTATGGAGGATTCCCTCCTAGTGCCAATTATTTATTCTTAGGAGATTATGTGGATCGTGGAAAGCAGAGCTTAGAGACCATTTGCCTTTTGCTTGCTTATAAAATCAAATATCCTGAGAACTTTTTCCTTTTGAGGGGAAATCATGAGTGTGCTTCCATTAATAGGATATATGGATTTTATGATGAATGTAAGCGACGGTTTAATGTGAGGCTTTGGAAGGCCTTCACAGAATGTTTTAACTGCCTTCCTGTGGCAGCCTTAATAGATGACAAAATATTGTGCATGCATGGTGGTCTTTCGCCTGACCTAACAAACCTGGACCAAATTAGAAATCTACCTCGTCCAACTGTTATTCCAGATACTGGCTTGCTTTGTGATTTGCTTTGGTCTGATCCTGGTAGAGATGTGAAGGGATGGGGCATGAATGATAGAGGAGTCTCATACACCTTCGGACCTGATAAGGTTGCTGAATTTTTGAACAAGCATGACTTGGATCTTGTCTGTCGTGCCCATCAGGTTGTAGAGGATGGGTATGAATTCTTTGCCGACAGGCAACTTGTTACAATATTTTCTGCTCCCAACTACTGTGGTGAATTTGACAATGCTGGTGCCATGATGAGTGTGGATGAAAACTTGATGTGCTCCTTCCAGATTCTTAAACCTGCAGAGAAAAAAGCAAAGTTTATGATGACAAACAAAATGTGA 951 0.4395 MSTQGQGGIDLALLDDIIKRLTEVRLARPGKQVQLSESEIKQLCVAARDIFLQQPVLLELEAPIKICGDVHGQYSDLLRLFEYGGFPPSANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTECFNCLPVAALIDDKILCMHGGLSPDLTNLDQIRNLPRPTVIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEFLNKHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKAKFMMTNKM 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1589 316 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 9 309 - -
Sto5g1589 316 CDD MPP_PP1_PPKL 14 303 - -
Sto5g1589 316 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Sto5g1589 316 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
Sto5g1589 316 Gene3D - 9 314 IPR029052 -
Sto5g1589 316 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Sto5g1589 316 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 309 - -
Sto5g1589 316 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Sto5g1589 316 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Sto5g1589 316 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Sto5g1589 316 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Sto5g1589 316 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Sto5g1589 316 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Sto5g1589 316 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Sto5g1589 316 SUPERFAMILY Metallo-dependent phosphatases 22 312 IPR029052 -
Sto5g1589 316 SMART pp2a_7 35 305 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1589 Sto-Chr5 11123653 11126138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1589 64 251 Calmodulin-binding Proteins AT5G63870 32.143 5.09e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1589 K06269 - pop:7458113 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1589 5 11123653 11126138 Sto5g1589 5 11123653 11126138 ECH