Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1570 ATGGGGGAACTGCCTCCTGCTGCTGCTAGTATTTCTGCTGTTGAGGGCATGGAAGCTGTAGAATCATATCACACCAATATGGTTCAACGTGTCCTTCCCAgcaATTATGCACCAAAGGAGGCTTTGCTGCACAGCTACAAGAAGAGTTTCAATGGATTTGTGGCGAGACTAACAGAAGAGGAAGCAGAAAGAATATCAGAAATGGAAGATGTGGTTTCTGTATTTGAAAACACAATCCACCATCCCCAAACAACGAGGTCATGGGACTTCTTAGGCTTTCCTGAACATGTGAGCAGATCAAGTGAAGAGGGAAACACCATTGTTGGAGTATTTGATTCTGGAATTTGGCCCGAGTCTGATAGCTTCAAGGATCAAGGATTCGATCCTCCACCCCCTGAATGGAAAGGCTCTTGCCAAAACATCACCTGCAATAACAAAATAATTGGAGCAAAATATTTTCGAGTTAGTGGTTTGTTTCTGGAAGATGATATTATATCTCCAAGGGATACCAATGGTCATGGGAGTCACTGTGCTTCTACGGCTGCCGGAAACGTTGTCGGATCGGCAAGTCTCTTGGGCCTCGCCTCAGGCACCGCCAGAGGAGGAGTCCCTTTGGCTCGTATTGCTGCGTACAAAGTTTGTTGGTATGCTGGCTGTGAAGATGCTGACATTCTTGCAGCATTTGATGAAGCAATTGCTGATGGTGTTCACGTCATTACTCTATCAATTGCTCCTGCTCAAGTGATTCCCACTCGCCCCTATTATGAGGATGTTTATGCTATAGGATCTTTTCATGCAATGAAGAACGGCATTCTAACGTCAAAAGCAGCGGGTAATAGGGGTCCTGAATTTTACACTATGCCCAATATGGCCCCATGGTTTGTATCTGTGGCTGCTAGCACTACTGATAGGAGGTTCTTAACCACGGTTCAGTTGGGGAATGGCAGGAATTATGAGGGAGTTTCGATAAACACTTTTATCCCTGATAGATTGTACCCATTGATTTACGGTGAAGATGCAGTTGCTGCAGGAGCTAGAAATTCCTCAGCTAGGCGTTGCTCTGGTAATTCTTTGAATCCAGCTCTGGTGAGGGGCAAGATTGTTCTGTGTGACAGTGCGAGTCCTACTCAGAGTAGGTTATTAACTAATGGGGTCGCTGGTATTATCATAAGAAATGACGGCACAAATGATGCGGGAAGAATCTATGCCTTGCCTGCAACTTCTCTTAGTCAAGTAAATGGCTCACACGTACTCAACTATATCAGATCAACGAGAAACCCAACTGGTCTTATATTGAGGAGTACTGAAGTCACTTTGGCCCCTACTGTAATTCCCTCCTCATCAAGGGGTCCAAATCGAATTACCCCTGACCTTCTACAGCCTGATATAGCAGCACCGGGACTTGAAATTCTATCTGCATACTCTCCCACTCGTTCAATTTCTGGGATTGCAGCTgataatagaaaagaaaagtacAGTATATTATCCGGTACTTCCATTGCTGCCCCTCATGTTGCTGCTATTGCTGCATACATCAAATCCTTTCATCCCACATGGTCCCCCGCAGCAATCAAATCTGCAATTTTGACCACAGCTACTCCAATCCGTGATTCTAGACTAAATAACGCAGAAGCTGAATTTGCATATGGAGCTGGTCAGTTAAATCCCACTGGGGCACTCAATCCTGGATTGGTATACAATTTGAGTGTCTCAGATTACGTGAGGTTCTTGTGTGGACAAGGTTATGACAACACAAAGCTACGACTCATTACAAGAGATAATAGTGATTGTGACCAAATACAGCATGAATTTGCATGGAACCTCAATCTCCCATCCTTCGTGCTTCCTAGaaataataatcaaaatttCCATCGTGTGTATCAAAGAAGTGTGACAAATGTTGGAAGAGCCACATCCACATATCGACCTATAACGACGGGTACTTCATCGGGCTTCAGGGTTCAAGTGACACCAACTGTTTTGTCATTCTCGTCAATTGGAGAGACGAGGTCATTTACGGTTACAGTTTCAGGGACAACGAGTAGACGTGTAACGTCTGCTTCTTTGGTTTGGGATGATGGCACTCACCAAGTGAGGAGCCCTATTGTGGAGCCCAATACTGAAGGGGCAGAGGGCGAGGAGAGTAGTGGGCCTGCAACAGAAGGTGATGGACCAGAAGGGGAGCATGGGACTCGTGCAACTCGCGTGAGACAACCACCAGTGTGGCTCAAGGATTTCgTTTCAATGGCAGAAACTCACAGTGTGGAATTGGTAGCAGTTGTTGTAGAATTGCAGAAGACTCAAGCCCTTCTAGAGAAACGTTGCACGGCGACTGATGATCGACTACTAAATGTGGAAGAGTTACTGGGAAGGTATATTCAGCAGATGACAGGAAAATCAGCAGATACGGCATCCGGACCCAACCAACGTCCGATGGTAAGTAACCTGAAATTCGAGATACCTCCATTTGACGGAACGGACGCCGAATACTGGGTATTCAAGATTAAAGAGTTCTTCAGAATTGCTGGAACACCGGAGGATCAACGCATTGGGTTAGCCGCGTTGTATATGACCGGACCTGCCTCAGCCTGGTATATGTGGATGTCACAGAACGGCCAGATCTCGACCTGGGACGCATTCTTGGATGCCTTGATTTTTCGCTTTGGCAGTACCCTTTACGAGGATGCTAGAGGAGCCTTGAAGCAAGTAGTGCAGGTGAATACGGTGGGTGAGTACCAAGCGGAATTTGAAGCCATTTCGACCAAGGTATCAGGGTTATCTGAAGAATGGCTCATCAGTTTTTTTGTGTTCGGCCTGAAGACACATCTGAAATGTGAAGTGCTGCTAGCACAACCCTCTACGTATTATCAAGCGGTTTCGCTGGCTAAGCTCCACGAGCAGAAACACAATGAGGTGCAGTTAGTTTATGGGACGTCAACGGGCAAGAGTAACGACTCACCACCTGGTAGATCCTTCAGTAAATTTCTACCAAACCAGGGAAGTGCAGCTGGTAGGTCTCTCATACCTGTGCCAGGAAGCAAGTCTGTAATGACACCAACGATCGGCAGTGGGGGAAGATCAGTGAGCTCACAAGGGTCAAACAATGTTAGTCATAACAACACTAACAATACCATACCAGCTTATAAACGATTTACGGCAGCAGAACTCAAGGACAGGCGAGCTCGCGGGTTGTGCTATTATTGCCCAAAGAAGTGGGTACGGGGTCACAAGTGCACCCCCACGTATTGTATATTGATAGCGAAAGAAGAGTTTGACCAGATGATAGATGATGAGGCAGAGGATAGTCCTACCGAGAGTGTAGTGATGGATGTGCCTGCGGAAGCAACAGGGGCTGTACCTGAAATCAGTTTCAATGCCTTAGAAGGGCAATTTCACCCAAGCACCATCCGAGTAACGGGAAGACATGAGGAGCACACGGTGCAGGTGTTAATCGATAATGGGAGTACCCTGAACTTCATTAAGAGAAGTGTAGCTGAGAAATTGAAATTGCAATTAAATGAAATCAAACCTTTCCGGGTTCAGACAGGGAACGGAGCCTTCCTTGTGTGCAATCATCAATGTAAGCAGGTTAAATTCATCGTCCAGCATCATGTGTTCATAGTAGATTTGTTTGTGATGGACATCAAAGGAGCAGATGTGGTTCTGGGAGTACAATGGCTTGCGGAGCTTGGCAATATTGTCATCAACCACAAGGATCTCACGATGAAATTTCAGCTTCAGGGTCAGGAGGTCAATCTGCAAGGAGAATCTATACTGAAGGAGACACCTGTGAATGGGAAGGCCATTAAAAAAATGGCCGAGGAGGATACAATTGCGTGTTTATTCTCTTTACAGAAAGTAACTGAAGAAGAGGGACAAGAGAAGCTCAAGTTACAAGAGGAGATAGACATGGTGTTGGAACAATACCAGGATGTTTTTAGTGAGCCCAAGCAGCTTCCACCTGTGAGGGAGGTGGATCATCACATTAACTTGATGCCCGGGAGCAAACCGGTTTCAGTGTGTCCCTACCGGTATCCCTATTTCCAGAAGGCAGAGATAGAGAGATTGGTAGAAGAAATGCTACAAACAGGGTTTGTGGTCGAGACAGATGCCTCCAGCTCTGGTATAGGTGCAGTGCTGAGTCAACAAGGTCACCCTATAGCCTATTTCAGCAAGAAACTCACCACGCGGATGTCACATGCCTCAACTTATGTTCGAGAATTGTTTGCCATCACGCAAGCAGTTATGAAGTGGCGTCATTATTTGCTGGGGAGGAAGTTTTTTATCAAAACCGATCATAAAAGTTTAAAGGAACTGATGCATCAAGTAATTCAGACCCCCGACCAGCAATTTTACCTTTCCAAATTGTTGGGGTTTGAGTATGAGATAGTGTACAGAACCGGAAAGACGAATATGGCAGCTGATGCGCTCTCGCGCAAGGATGAATTTGCTGTCACTAGTGAAAATGAACCTCAAATAATGCTGTTGAGTGAGTACAAACATGAGATTATAGCAGAGATAAGGAAGGCCAATCGAGAAGAGGATGAGTTACTCCAGCTACACTCGGATTACAAACAGCAGCAACTAACACCAGAATACTCGGTCAGGGAGGGCATACTGTTCTTTGAAGGCCGAATGATGGTACCTGGCTACCGAGGAGGGGATTCGAAGGTGGAGAGTGTTGATGACCTGCTGAAAAGGCGTGACGCGTTGCAACAAACGCTCTGA 4728 0.4571 MGELPPAAASISAVEGMEAVESYHTNMVQRVLPSNYAPKEALLHSYKKSFNGFVARLTEEEAERISEMEDVVSVFENTIHHPQTTRSWDFLGFPEHVSRSSEEGNTIVGVFDSGIWPESDSFKDQGFDPPPPEWKGSCQNITCNNKIIGAKYFRVSGLFLEDDIISPRDTNGHGSHCASTAAGNVVGSASLLGLASGTARGGVPLARIAAYKVCWYAGCEDADILAAFDEAIADGVHVITLSIAPAQVIPTRPYYEDVYAIGSFHAMKNGILTSKAAGNRGPEFYTMPNMAPWFVSVAASTTDRRFLTTVQLGNGRNYEGVSINTFIPDRLYPLIYGEDAVAAGARNSSARRCSGNSLNPALVRGKIVLCDSASPTQSRLLTNGVAGIIIRNDGTNDAGRIYALPATSLSQVNGSHVLNYIRSTRNPTGLILRSTEVTLAPTVIPSSSRGPNRITPDLLQPDIAAPGLEILSAYSPTRSISGIAADNRKEKYSILSGTSIAAPHVAAIAAYIKSFHPTWSPAAIKSAILTTATPIRDSRLNNAEAEFAYGAGQLNPTGALNPGLVYNLSVSDYVRFLCGQGYDNTKLRLITRDNSDCDQIQHEFAWNLNLPSFVLPRNNNQNFHRVYQRSVTNVGRATSTYRPITTGTSSGFRVQVTPTVLSFSSIGETRSFTVTVSGTTSRRVTSASLVWDDGTHQVRSPIVEPNTEGAEGEESSGPATEGDGPEGEHGTRATRVRQPPVWLKDFVSMAETHSVELVAVVVELQKTQALLEKRCTATDDRLLNVEELLGRYIQQMTGKSADTASGPNQRPMVSNLKFEIPPFDGTDAEYWVFKIKEFFRIAGTPEDQRIGLAALYMTGPASAWYMWMSQNGQISTWDAFLDALIFRFGSTLYEDARGALKQVVQVNTVGEYQAEFEAISTKVSGLSEEWLISFFVFGLKTHLKCEVLLAQPSTYYQAVSLAKLHEQKHNEVQLVYGTSTGKSNDSPPGRSFSKFLPNQGSAAGRSLIPVPGSKSVMTPTIGSGGRSVSSQGSNNVSHNNTNNTIPAYKRFTAAELKDRRARGLCYYCPKKWVRGHKCTPTYCILIAKEEFDQMIDDEAEDSPTESVVMDVPAEATGAVPEISFNALEGQFHPSTIRVTGRHEEHTVQVLIDNGSTLNFIKRSVAEKLKLQLNEIKPFRVQTGNGAFLVCNHQCKQVKFIVQHHVFIVDLFVMDIKGADVVLGVQWLAELGNIVINHKDLTMKFQLQGQEVNLQGESILKETPVNGKAIKKMAEEDTIACLFSLQKVTEEEGQEKLKLQEEIDMVLEQYQDVFSEPKQLPPVREVDHHINLMPGSKPVSVCPYRYPYFQKAEIERLVEEMLQTGFVVETDASSSGIGAVLSQQGHPIAYFSKKLTTRMSHASTYVRELFAITQAVMKWRHYLLGRKFFIKTDHKSLKELMHQVIQTPDQQFYLSKLLGFEYEIVYRTGKTNMAADALSRKDEFAVTSENEPQIMLLSEYKHEIIAEIRKANREEDELLQLHSDYKQQQLTPEYSVREGILFFEGRMMVPGYRGGDSKVESVDDLLKRRDALQQTL 1575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1570 1575 Pfam Retroviral aspartyl protease 1144 1243 - -
Sto5g1570 1575 PANTHER CUCUMISIN-LIKE 17 707 - -
Sto5g1570 1575 MobiDBLite consensus disorder prediction 1021 1041 - -
Sto5g1570 1575 Pfam Ty3 transposon capsid-like protein 844 966 IPR045358 -
Sto5g1570 1575 Pfam Subtilase family 106 552 IPR000209 GO:0006508|GO:0008236
Sto5g1570 1575 MobiDBLite consensus disorder prediction 980 1009 - -
Sto5g1570 1575 Gene3D - 577 705 - -
Sto5g1570 1575 CDD Peptidases_S8_3 80 533 IPR034197 -
Sto5g1570 1575 SUPERFAMILY DNA/RNA polymerases 1363 1466 IPR043502 -
Sto5g1570 1575 PRINTS Subtilisin serine protease family (S8) signature 103 122 IPR015500 -
Sto5g1570 1575 PRINTS Subtilisin serine protease family (S8) signature 169 182 IPR015500 -
Sto5g1570 1575 PRINTS Subtilisin serine protease family (S8) signature 496 512 IPR015500 -
Sto5g1570 1575 SUPERFAMILY DNA/RNA polymerases 1306 1367 IPR043502 -
Sto5g1570 1575 Gene3D - 303 437 - -
Sto5g1570 1575 MobiDBLite consensus disorder prediction 695 736 - -
Sto5g1570 1575 Coils Coil 1496 1527 - -
Sto5g1570 1575 Pfam RNase H-like domain found in reverse transcriptase 1364 1457 IPR041373 -
Sto5g1570 1575 Gene3D Peptidase S8/S53 domain 106 573 IPR036852 GO:0004252|GO:0006508
Sto5g1570 1575 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 82 IPR037045 -
Sto5g1570 1575 ProSiteProfiles Serine proteases, subtilase domain profile. 87 560 - -
Sto5g1570 1575 MobiDBLite consensus disorder prediction 980 1000 - -
Sto5g1570 1575 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 707 IPR045051 -
Sto5g1570 1575 CDD RNase_HI_RT_Ty3 1366 1480 - -
Sto5g1570 1575 Pfam Fibronectin type-III domain 607 703 IPR041469 -
Sto5g1570 1575 ProSitePatterns Serine proteases, subtilase family, serine active site. 497 507 IPR023828 -
Sto5g1570 1575 Gene3D - 1361 1431 - -
Sto5g1570 1575 CDD PA_subtilisin_like 309 431 - -
Sto5g1570 1575 Gene3D Acid Proteases 1125 1255 IPR021109 -
Sto5g1570 1575 ProSitePatterns Serine proteases, subtilase family, histidine active site. 173 183 IPR022398 -
Sto5g1570 1575 CDD retropepsin_like 1138 1228 - -
Sto5g1570 1575 Pfam Peptidase inhibitor I9 20 79 IPR010259 -
Sto5g1570 1575 SUPERFAMILY Acid proteases 1132 1232 IPR021109 -
Sto5g1570 1575 SUPERFAMILY Subtilisin-like 83 564 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1570 Sto-Chr5 10955931 10966858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1570 42 703 Subtilisin-like Serine Gene Family AT5G59100 47.781 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1570 - - gmx:100801111 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1570 5 10955931 10966858 Sto5g1570 5 10955931 10966858 CCT
Sto5g1571 5 10970424 10990739 Sto5g1570 5 10955931 10966858 CCT
Sto5g1570 5 10955931 10966858 Sto5g1570 5 10955931 10966858 ECH