Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1556 ATGGTGAAGGGACGCCAAGGAGAGCGCGTCAGACTTTATGTCAGAGGTTCAATCCTCGGATACAAGAGGTCCAAGTCAAATCAATACCCAAATACATCACTTATCCAAATTGAGGGAGTGAACTCCAAGGAAGAGGTTGCATGGTACCGTGGCAAGCGCATGGCATACATTTACAAGGCCAAGGTAAAGAAGAATGGAAGCCACTATCGCTGCATTTGGGGTAAGGTTACCAGGCCCCATGGTAACAGTGGTGTTGTTCGTGCCAAATTCAAGTCTAATTTGCCACCCAAATCAATGGGAGCTAGGGTTAGAGTGTTCATGTATCCAAGCAACATTTGA 339 0.4631 MVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNSKEEVAWYRGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1556 112 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 1 112 - -
Sto5g1556 112 PANTHER 60S RIBOSOMAL PROTEIN L35A 1 112 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sto5g1556 112 Gene3D translation elongation factor selb, chain A, domain 4 6 112 IPR038661 -
Sto5g1556 112 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sto5g1556 112 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sto5g1556 112 SUPERFAMILY Translation proteins 12 106 IPR009000 -
Sto5g1556 112 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1556 Sto-Chr5 10818704 10819980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1556 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 91.071 2.37e-75 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1556 K02917 - sind:105161568 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1556 5 10818704 10819980 Sto5g1556 5 10818704 10819980 ECH