Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1528 ATGTTGAAGACATTGAACTTGTCTTTTAATAATCTCCATGGTGAGGTTCCAAGAGGAGGAGTTTTTGATAACTTCTCTGCAATTTCACTCACAAGAAATGAAGATCTTTGTGGTGGGATACCTCAATTAAAGTTTCCTACATGCCCAAATAAGCCCAAGAAGCACTTCAAAACCAAAGTTATAGTACTCATAACTGTGATGAGCATTGTTGTTATATGTTCAGCAATTTTCATGAGTAATTATTTGAGAAGAAAGCCAAAGAAGTTATCTTCCTCTCCATCTTCTTTTCAAAATAAACTCTTGAAAGTTTCTTATAAGGAGTTACACGATGCAACCGACGGATTTTCTTTGTCCAATTTGGTTGGGATGGGAAGCTTTGGTTCAGTGTACAAAGGAACACTTCACCACTTTGAAAGACCTATTGCTGTGAAGGTGCTAAATCTTCAAACCCGTGGGGCATCAAAGAGTTTTGTCTCTGAATGCAAAGCTCTCAGTAAAGTTCGACATCGGAATCTTCTAAAGGTCCTAACTTGTTGTTCAAGTGTTGATTACAAAGGTGATGATTTCAAGGCTCTAGTTTTCGAGTTCATGCCTAATGGGAGTTTGGAGAATTGGCTGTCAAGTGATCAAGAACAAGGTGAATCCAAAAATCTACATCTGAGTTTTGCACAAAGATTAGACATAGCCATTGATGTAGCTCATGCCTTGGATTATCTTCATCATGACTTTGAGGAGGAAGCTATTGTTCATTGTGACATTAAGCCAAGTAATGTTCTTCTTGATGATGACTTTGTGGCTCATTTGGGAGACTTTGGATTAGCCAGACTTCTTCATGGGGATACAATTGACCATTCTAGTAAAGATCAAACTACTTCCTCAGCAATAAAAGGAACCATTGGGTATATTCCACCAGAATATGGAGCAGGTGGTCCAGTGACCCCACAAGGAGATATCTACAGCTATGGAATTCTTCTGCTAGAGATGCTCACTGGGAAGAAGCCAACAGATAGAATGTTTGATGAAGATATGAGCTTGCACAAGTTTTGCAAAATGGCATTGCCAGAAGGAAATATTGATGAGATAGTGGATTCAAGTTTTCTTGTCCCAAATATGGAACTTAAAGTTGGAGAATCCTTTGTGAGCTTTGGTAGGATTGGAGTGGCTTGTTCTGCAGAATTTCCCAGTGAAAGAATGGAGATAAAAGATGTTGTAGCAGAGTTGCTTGCAATTAAGAAGAGGCTGTCCCCACAAGGTATCAACCTTGTGATTCAAAATTAG 1278 0.3889 MLKTLNLSFNNLHGEVPRGGVFDNFSAISLTRNEDLCGGIPQLKFPTCPNKPKKHFKTKVIVLITVMSIVVICSAIFMSNYLRRKPKKLSSSPSSFQNKLLKVSYKELHDATDGFSLSNLVGMGSFGSVYKGTLHHFERPIAVKVLNLQTRGASKSFVSECKALSKVRHRNLLKVLTCCSSVDYKGDDFKALVFEFMPNGSLENWLSSDQEQGESKNLHLSFAQRLDIAIDVAHALDYLHHDFEEEAIVHCDIKPSNVLLDDDFVAHLGDFGLARLLHGDTIDHSSKDQTTSSAIKGTIGYIPPEYGAGGPVTPQGDIYSYGILLLEMLTGKKPTDRMFDEDMSLHKFCKMALPEGNIDEIVDSSFLVPNMELKVGESFVSFGRIGVACSAEFPSERMEIKDVVAELLAIKKRLSPQGINLVIQN 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1528 425 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Sto5g1528 425 ProSiteProfiles Protein kinase domain profile. 115 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1528 425 PANTHER LRR RECEPTOR-LIKE KINASE 2 415 - -
Sto5g1528 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Sto5g1528 425 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 415 - -
Sto5g1528 425 Gene3D Phosphorylase Kinase; domain 1 76 196 - -
Sto5g1528 425 Gene3D Transferase(Phosphotransferase) domain 1 197 419 - -
Sto5g1528 425 SMART serkin_6 115 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1528 425 Pfam Protein kinase domain 117 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1528 425 SUPERFAMILY Protein kinase-like (PK-like) 92 413 IPR011009 -
Sto5g1528 425 Gene3D Ribonuclease Inhibitor 1 57 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1528 Sto-Chr5 10610784 10612153 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1528 2 413 Receptor kinase-like Gene Family AT3G47570 46.495 6.01e-118 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto5g1528 Pkinase 3.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1528 - - ahf:112766492 509.99