Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1526 ATGGGGAGAAACTCTCCCCATGGCGAGAATCAGAGACAGGGACGGGGGAAGTTTGGAGATGGGGAAAGTTTGGAGATGGTGGGGCAGGAACGGGGAGAGCACGTAGCGGGTACAAATGAATTCAAGGGGGTGTTGCCTGATTCTATTGCTAATCTTTCCACCAACCTTGAGAGATTGACTCTAAATAGCAATCAAATATATGGGGCCATTCCATCAGGGATAGGAAATCTAGCTAACTTGTATTTGTTGGGCATGGAATTTAACCAGTTCACAGGTTCAATTCCAGCAGAGTTTGGCAAGCTTCAGAAACTACAATGGACATCTCTTGATCACAACAAACTATCAGGCAAGATTCCTTCTTCTCTTGGAAATCTTACATCTTTGACAGAGCTTCACCTGCGGAATAACAAGTTACAGAAAACTATCCCACCTAGTTTAGGACAATGCCAAACATTGATGATCTTAGATCTTTCCAGAAATGAACTTTCTGGATCCATACCCCAAGAAATCTTTGATAGTTCCTCTCTGTCAGTTCTATTGAAATTGAACCTGAGTAGTAACCATTTGGTTGGATCAATGCCTCTAAATATTGGTAGCCTGAAGAACATTATGGAACTTGATGTGTCAGAGAATAGGCTCTCTGGTGAAATTCCAGAAAGCTTGATTTCTTGTAGTAGCCTTGAGAGCTTATACATGCAGGGAAACATGTTTGAGGGGTTGCTTCCTGAATCCTTAGATTCTTTGAAAGGAATCCAACTCATTGATATCTCACGTAACAAGTTTTCAGGGAAAATTCCTAACTTCTTGGAGATGCTTCCCTTGAAATCTCTAAATTTATCCTTCAATGACTTTGAGGGTGAAGTACCATCTAAAGGAGTATTTGCAAATGCGAGTGCAATTTCAGTAGTTGGAAATACAAGGCTTTGTGGGGGAATTTCCAAACTAGGATTGCCCAAATGCTCAAAGCAAAAAAGGATGCCTCTTGCAGTCAAAATTCTCATCTCACTGTCATGTGCCTTTCTAGGAGTAATACTTTTGACATGCTCAATTTCTTGGGCCATCAAAAGAAGAGTCCAGAAATCTCCTGTAGTTTTGCTGAGGAAGGAACTAGTTCAAGTGTCTTACAATGATCTCCTTAAAGCAACTGATGGATTCTCTTCAGAAAACTTGGTTGGTGAAGGCAACTTTGGTTCTGTGTACAAGGGAGTCCTTGAAAAGCTAGGAGGAGAACTTGTTGCCATCAAAGTCCTTAAGCTTCAAAATGAGAGAGCTGCCAAGAGTTTCGTGGCCGAATGCAAAGCCTTGGCCGCTATTCGGCACCGGAACCTTGTCAAGGTCATCACTTGCTGCTCTTCAGTTGATTTTCAAGGGAATGATTTTAAAGCTCTTGTTTATCAGTTCATGACTAATGGAAGCCTGGAAGCCTGGTTGCATCCAGAGGCACAGGAAGATGATAGGCAAGCTGAATCACAAAGACTAGGACTTGTTCAGAGAATCAACATTGCAATTGATGTGGCTTGTGCAATGGACTGTTTTCATCACCAAAACACCATGAAAATGATCCATTGTGATCTAAAACCAAGTAATATTCTTCTTGATGCAGACATGACTGCACATGTTGGTGATTTTGGGCTCGTGAGGTTTCTTTCTGGCCTCTCAACCTCAAATGACAGTAGTTCTGGTTGGTTAAGAGGAACAATTGGGTATGCAGCTCCAGAGTATGGACTTGGAAGCCAGGTGTCAACACATGGGGATGTGTACAGTTATGGAATTGTGCTGTTGGAGATGATGACAGGGAAAAGACCAACTGATGCTGTTTTCCAGGAAGGCCTTGATCTGCATAGTCATGCCACTATGGCCTTACCTGATCAGGTTATGACCATTGTGGATCCAGTGCTTCTAAACAGTGAAACAGAAGATTCAACAAATAATCATTGGCAACAAATGCAAACCAGGAATGACATTGGAAATGCATGCCTAAAATCTCTTATACAAATTGGGGTGGCATGTTCAGTGGAGTCACCACAAGAAAGGATGGACATAAAGGATGTCATAGTTGAGTTGCAAAAGATCAAAGACATGCTTGTCAGGCGTGGAAGAACTAGGCATTAA 2112 0.4205 MGRNSPHGENQRQGRGKFGDGESLEMVGQERGEHVAGTNEFKGVLPDSIANLSTNLERLTLNSNQIYGAIPSGIGNLANLYLLGMEFNQFTGSIPAEFGKLQKLQWTSLDHNKLSGKIPSSLGNLTSLTELHLRNNKLQKTIPPSLGQCQTLMILDLSRNELSGSIPQEIFDSSSLSVLLKLNLSSNHLVGSMPLNIGSLKNIMELDVSENRLSGEIPESLISCSSLESLYMQGNMFEGLLPESLDSLKGIQLIDISRNKFSGKIPNFLEMLPLKSLNLSFNDFEGEVPSKGVFANASAISVVGNTRLCGGISKLGLPKCSKQKRMPLAVKILISLSCAFLGVILLTCSISWAIKRRVQKSPVVLLRKELVQVSYNDLLKATDGFSSENLVGEGNFGSVYKGVLEKLGGELVAIKVLKLQNERAAKSFVAECKALAAIRHRNLVKVITCCSSVDFQGNDFKALVYQFMTNGSLEAWLHPEAQEDDRQAESQRLGLVQRINIAIDVACAMDCFHHQNTMKMIHCDLKPSNILLDADMTAHVGDFGLVRFLSGLSTSNDSSSGWLRGTIGYAAPEYGLGSQVSTHGDVYSYGIVLLEMMTGKRPTDAVFQEGLDLHSHATMALPDQVMTIVDPVLLNSETEDSTNNHWQQMQTRNDIGNACLKSLIQIGVACSVESPQERMDIKDVIVELQKIKDMLVRRGRTRH 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1526 703 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 38 691 - -
Sto5g1526 703 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED 38 691 - -
Sto5g1526 703 SMART serkin_6 385 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1526 703 ProSiteProfiles Protein kinase domain profile. 385 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1526 703 SUPERFAMILY L domain-like 39 310 - -
Sto5g1526 703 Gene3D Ribonuclease Inhibitor 34 324 IPR032675 -
Sto5g1526 703 SUPERFAMILY Protein kinase-like (PK-like) 361 688 IPR011009 -
Sto5g1526 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Sto5g1526 703 Pfam Leucine rich repeat 127 189 IPR001611 GO:0005515
Sto5g1526 703 ProSitePatterns Protein kinases ATP-binding region signature. 391 415 IPR017441 GO:0005524
Sto5g1526 703 Pfam Protein tyrosine and serine/threonine kinase 388 685 IPR001245 GO:0004672|GO:0006468
Sto5g1526 703 Gene3D Transferase(Phosphotransferase) domain 1 468 699 - -
Sto5g1526 703 SMART LRR_typ_2 176 200 IPR003591 -
Sto5g1526 703 SMART LRR_typ_2 152 173 IPR003591 -
Sto5g1526 703 SMART LRR_typ_2 54 77 IPR003591 -
Sto5g1526 703 SMART LRR_typ_2 224 247 IPR003591 -
Sto5g1526 703 SMART LRR_typ_2 125 149 IPR003591 -
Sto5g1526 703 MobiDBLite consensus disorder prediction 13 29 - -
Sto5g1526 703 Gene3D Phosphorylase Kinase; domain 1 347 467 - -
Sto5g1526 703 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1526 Sto-Chr5 10595003 10601304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1526 10 701 Receptor kinase-like Gene Family AT3G47090 43.865 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto5g1526 PK_Tyr_Ser-Thr 2.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1526 - - tcc:108663579 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1526 5 10595003 10601304 Sto5g1526 5 10595003 10601304 ECH