Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1525 ATGCTTATCTTCTTCAACTCAAGTATGCATTTCATTCTTGTTTTCTCTGTCACATTACTTTGCCTACTATTACCTTCATCCTCTGTTTCTTCTGCTTCAGCAAATGAAACAGATAGGTTGGCACTGCTTGAAGTTAAAGGGTCAATAGAAAAAGACCCACATGGAGTTCTAAGCTCATGGAATTGGAACAACTCCATTCATTTCTGCAAGTGGCGAGGGGTTACTTGTGGCCCACGTCATCCAAGAGTCATTGCCTTGGATCTTCAAGGCCATGAATTGCAAGGTTCAATATCGCCTCACATTGGTAATTTGAGCTTCCTTAGAGTCCTCACACTTCGAAACAACACTTTCCATGGAAAAATTCCTTTGGAACTCGGGCGTTTGTTTCGGCTCGAAAGGCTTGTGCTTGAGAACAACACGTTAGAAGGAGAAATCCCGGTCAACTTAACTAGGTGTTCAAGGCTTGGGTTCATGTTTCTTGGAGGGAATAAGCTGACTGGAGGAATCCCTTTTGAGATTGGTTCGTTGATGAATCTTGTCATTCTTGATGTTTCTAGAAACAATCTCACAGGAAGTATCCCACCCCCCATAGGTAATCTCTCATCATTGCAAGTCTTTGTTGCGTATGCAAATAGCTTGGAGGGTAATATTCCAGAAGAAATAGGTAGCTTGAAGAGCaagttatctatattaaatattGCAGGCAATAAGCTCTCTGGTAAGATACCTTCATCCATTTACAATCTATCATCTTTGACGAGAATTTCGATGACTAATAACCAATTGGAAGGAGTTCTCCCTCACAACATAGATGATTGTTTTCCAAAACTCGAACTACTTGGCCTTTCTCAGAACAGATTCTCTGGGATCATCCCGGTTTCGTTGTCAAATATTTCTCGGCTTCTAGTCCTTGATTTGTTTGGGAACAACTTTGTTGGAAAAGTTCCTACAAATTTGGGGAAGTTAGGTAACCTAAAATGGCTAGCTCTAGTTGACAACAATCTAGGAAATAACTCAACTAATGACCTTGATTTCTTAAACTCTTTGACTAATTGTAGCGAACTTCAGACATTGGGTTTCAGTTCAAACAATTTTGGAGGTCATCTACCAAGCTCTATTGCAAATCTTTCAACCAAACTCATTAGGATTAGTTTTGATGATAATATGATATCTGGAAACATACCTGAAGGAATTGGGAATCTCATCGGTTTATCTGTGTTGACCATGTCTGGTAACCTCTTAACAGGAAATATTCCTTCATCATTGGGAAACTTGAGGGAGATGGGTATATTAGATCTTAGAAGTAACAGACTGTCTGGTCAAATTCCATTCTCCATAGAGAATAAGCTTAGTGGAAATATAACCCTTGAAGTCTTCAGTCTCTCTTCCATATCATCTTTACTAAGCTTGTCTAGGAACCTTCTTACTGGTAGCTTACCCCATGAAATAGGCAATTTGCATAATGTTGAGACATTGGACCTTTCAGAAAACCATCTTTCTGGTGAGATTCCTTCGGCCATTGCGAGTTGTATAAGCCTAGAATACCTTTACTTGCAAGGAAATTTCTTTCAAGGGAAAATACCTTCCACTTTGACATCCTTAAAAGGTTTACTAGATTTGGATCTTTCACGAAACAACTTGTTGGGAGAAATTCCGAAAGATTTGGTGAAGCTACCTTCTTCAATGAATTTAAACCTTTCTTTCAATAACCTAGAAGGTGAGGTACCAAAAGAAGGGGTTTTCAGCAATGCAAGTGCCATATCAGTTAGTAGAAATGGTTTACTTTGTGGGGGTGTAATGGAACTCAAACTATCACCATGTCCAACCACAAAAAGTGGTAAACACCATTCTTCAAAGCTCACAATTACAATTGCTTCTGTAATTGGAAGTCTCCTCTTGTTGTCATCCCTTCTTACCATTTTGTGGGTGTTAAAATCCAAGACAAAATCATGCCTTACCCAATCCACAATTGAGCATCTCCCAAATGTTTCTTATAGAACACTCCATCAAGCTACTGAGGGATTCTCTCCCAATTACTTGATAGGTTCTGGAAGTTTTGGATTAGTATATCGAGGAAATCTCGATTCAGAAGGAGAAGTTGCTGTGAAAGTTCTCAAACTTCAAAACAAAGGAGCTTCCAAGAGTTTCATAGCCGAATGTAATGCATTAAGAAATGTTCGACATCGCAATCTTGTGAGCATCGTAACTTGTTGCTCAAGCACAGATTACAATGGCAATGAGTTCAAGGCTTTGGTTTTTGATTTCATGGAAAATGGGAGCTTAGATCAGTGGCTGCATTCAGATATTGATTGTGAAAATGGATCATCAAGAATGTTGAACTTTCTTCAAAGGCTAAATATAGCAATAGATGTGGCTTTTGCATTGTGTTATCTTCATGACCAATGTGAATCACCTATTGTTCACTGTGATTTAAAGCCAAGCAATGTGCTTCTTGACAAAGAGATGGTTGCTCATGTGGGTGATTTTGGTTTGGCAAGACTTCTCTCTGCTACCAATAATATGCcacaaaatcaaattagttcAATTGGTATAAAGGGAACCATTGGCTATGCTGCACCAGAGTATGGAATGGGAACTGATGTGTCAACTAAAGGGGATGTCTATAGCTTTGGTATCTTGATGCTAGAGATGTTCACAGGAAAAAGACCAACTGATAATATGTTCAGAGGTGACTTGAACCTTCCTATATTTGCAAAACAAGCTTTGATGGGAGATCTTGTTGTTCAAATTGTGGACCCAACTTTGCACCAAACAGATTCTGCAGGAGAAGATAATAATAACAATGTGAATGCTCATGTTTTGCATTGCTTGCTTCTGGTTTTCAAAATTGGAATTGCATGTGCAGGGGAATCTGCTAAAGAAAGAATGGATATGGGAGATGTAGTGCAGCAACTGCAAAAGGTCAAGAATGAATTTCTAGGTAGAGGAAGGAGATTGAATTAG 2964 0.3866 MLIFFNSSMHFILVFSVTLLCLLLPSSSVSSASANETDRLALLEVKGSIEKDPHGVLSSWNWNNSIHFCKWRGVTCGPRHPRVIALDLQGHELQGSISPHIGNLSFLRVLTLRNNTFHGKIPLELGRLFRLERLVLENNTLEGEIPVNLTRCSRLGFMFLGGNKLTGGIPFEIGSLMNLVILDVSRNNLTGSIPPPIGNLSSLQVFVAYANSLEGNIPEEIGSLKSKLSILNIAGNKLSGKIPSSIYNLSSLTRISMTNNQLEGVLPHNIDDCFPKLELLGLSQNRFSGIIPVSLSNISRLLVLDLFGNNFVGKVPTNLGKLGNLKWLALVDNNLGNNSTNDLDFLNSLTNCSELQTLGFSSNNFGGHLPSSIANLSTKLIRISFDDNMISGNIPEGIGNLIGLSVLTMSGNLLTGNIPSSLGNLREMGILDLRSNRLSGQIPFSIENKLSGNITLEVFSLSSISSLLSLSRNLLTGSLPHEIGNLHNVETLDLSENHLSGEIPSAIASCISLEYLYLQGNFFQGKIPSTLTSLKGLLDLDLSRNNLLGEIPKDLVKLPSSMNLNLSFNNLEGEVPKEGVFSNASAISVSRNGLLCGGVMELKLSPCPTTKSGKHHSSKLTITIASVIGSLLLLSSLLTILWVLKSKTKSCLTQSTIEHLPNVSYRTLHQATEGFSPNYLIGSGSFGLVYRGNLDSEGEVAVKVLKLQNKGASKSFIAECNALRNVRHRNLVSIVTCCSSTDYNGNEFKALVFDFMENGSLDQWLHSDIDCENGSSRMLNFLQRLNIAIDVAFALCYLHDQCESPIVHCDLKPSNVLLDKEMVAHVGDFGLARLLSATNNMPQNQISSIGIKGTIGYAAPEYGMGTDVSTKGDVYSFGILMLEMFTGKRPTDNMFRGDLNLPIFAKQALMGDLVVQIVDPTLHQTDSAGEDNNNNVNAHVLHCLLLVFKIGIACAGESAKERMDMGDVVQQLQKVKNEFLGRGRRLN 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1525 987 ProSitePatterns Protein kinases ATP-binding region signature. 681 703 IPR017441 GO:0005524
Sto5g1525 987 Gene3D Phosphorylase Kinase; domain 1 655 755 - -
Sto5g1525 987 SMART LRR_typ_2 249 273 IPR003591 -
Sto5g1525 987 SMART LRR_typ_2 274 297 IPR003591 -
Sto5g1525 987 SMART LRR_typ_2 486 510 IPR003591 -
Sto5g1525 987 SMART LRR_typ_2 176 200 IPR003591 -
Sto5g1525 987 SMART LRR_typ_2 534 558 IPR003591 -
Sto5g1525 987 SMART LRR_typ_2 128 152 IPR003591 -
Sto5g1525 987 SMART LRR_typ_2 401 425 IPR003591 -
Sto5g1525 987 Gene3D Ribonuclease Inhibitor 344 616 IPR032675 -
Sto5g1525 987 SUPERFAMILY L domain-like 275 597 - -
Sto5g1525 987 SMART serkin_6 675 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1525 987 ProSiteProfiles Protein kinase domain profile. 675 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1525 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Sto5g1525 987 SUPERFAMILY L domain-like 34 335 - -
Sto5g1525 987 Gene3D Ribonuclease Inhibitor 34 195 IPR032675 -
Sto5g1525 987 Pfam Protein tyrosine and serine/threonine kinase 681 895 IPR001245 GO:0004672|GO:0006468
Sto5g1525 987 SUPERFAMILY Protein kinase-like (PK-like) 652 972 IPR011009 -
Sto5g1525 987 Pfam Leucine rich repeat 512 571 IPR001611 GO:0005515
Sto5g1525 987 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
Sto5g1525 987 Gene3D Transferase(Phosphotransferase) domain 1 756 981 - -
Sto5g1525 987 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 9 448 - -
Sto5g1525 987 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 447 980 - -
Sto5g1525 987 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 448 - -
Sto5g1525 987 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 447 980 - -
Sto5g1525 987 Gene3D Ribonuclease Inhibitor 196 343 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1525 Sto-Chr5 10590337 10593914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1525 34 984 Receptor kinase-like Gene Family AT3G47570 45.000 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto5g1525 PK_Tyr_Ser-Thr 7.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1525 - - rcn:112169086 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1525 5 10590337 10593914 Sto5g1525 5 10590337 10593914 ECH