Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1524 ATGGCTCATACTCCCCAAAGACTTCCTCAAATCTTCCATTTGATTCTTGTTTTCTCTGTCTCTTCACTATGGCTACAACCCAAACCCACACATGTTTCTGCTGTTTTTACAAATGAAACAGATATGTCTGCACTACTCAAAGTTAAAGAGTCAATAGAAAAAGATCCAAAAGGGGTTTTAAGCTCTTGGAACCACTCCCTTCATTTCTGCAAATGGCGTGGGGTTACTTGTGGCACACGCCACCCTAGAGTCATAGCCTTAGATCTTCAAGGCCATGACTTGAGGGGTTCAATATCCCCTTACATTGGTAATTTGAGCTTTCTTAGGTTCCTTGACCTTGGAAAAAACACCTTCCATGGAAGAATTCCATCAGAAATAGGCCATTTGTTTCGCCTGCGATGGCTTATGCTTAGTAATAACACATTGGGAGGAGAAATCCCTTTCAACTTGACCAAGTGTTTGAGATTGAGGTCCCTTTACCTGTCTTGGAACCAACTTACTGGAGCAATtccttttgagattgaatcctTGAAAAATCTTGAAAGGCTTAGTGTTTCTAGAAACCATTTGACAGGAAATATCCCACCTTCTTTAGGTAATCTCTCATCATTGCAAGGTTTTGCAGCAGCAGGGAATAACTTGGAGGGTAGCATTCCAGGAGAACTTGGTGGTTTGAAAAGCTTATCATTTTTGCTAATTGAACTCAATAATTTCAGTGGTAAGATACCTTTGTCCCTTTACAATCTATCATCTATTGTGGAGTTTTCAGTAGCATACAACCATTTGGAAGGAGTTATTCCAAACAACATAGGTGATTGCTTTCCAAAACTTGAAGCAATTACCTATGGTGGGAACAACTTCTTCGGGGAAATCCCGGTTTCGTTTTCGAATATTTCCCAGCTTCGAGTGCTTGATTTGTTCGATAACAACTTTGTGGGAAATGTTCCTGGGAATCTAGGGAAGTTAGGTAACTTGTGGTGGCTAGGTCTAGCTAAAAATCATTTGGGAAGTAATTCAACAAGCGACCTTCATTTCATAACATCTTTGGCTAACTGTAGCATACTTGAGATACTTGACTTACCGTCGAACAATTTTGGAGGTCGTTTACCAAATGATATAGCTAATCTTTCAACCAAACTCAGTTGGTTTGATTTGCATTCTAATAACATTATTGGAAACATACCTGAGGGAATTGGAAATCTTGTGAATTTATCTACACTAACCTTGAGTTATAACCTTATGAGAGGCAATATTCCCTCTTCTTTGGGAAACTTGAGGGATATGGGTATATTAGATCTTAGTAGCAATGGCCTCTTTGGTCAAATTCCAATCTCCATAGGCAATCTTTCAAAATTGGTTGAACTCTACTTAAATCATAACAATTTAGAAGGGAAAATTCCCTCTAGTATTGGTAATTGCAAAAACTTGCAAATATGGGATGTTTCAGAGAATAAGCTAAGTGAAGATATACCCCTTCAAGTCTTTGGTCTTTCTTCCTTGTCAAAGTTACTAAATTTGTCTAGCAACTATTTTACTGGTAGCTTACCACAAGAAATAAGCAATCTGCATAATATTGATGCACTAGACCTTTCAAAAAACCATCTTTCTGGTGAAATTCCTTCAGCCATTGGGGGTTGCCTAAGCCTAGAATTCCTTTACTTGCAAGAGAATTTCTTTGAAGGGAAAATACCTTCCTCCTTGAGTTCCTTAAAGGGTTTACTGGTTCTGGATCTTTCACAAAACAACTTGTCAGGAGAGATTCCAAAGAATTTGGTGAAGCTGCCTCCTTCAATGAATTTAAATCTTTCGTTCAATAATCTAGAAGGCGAGGTGCCGGTAAAAGGCGTTTTCAGCAATGCAAGTGCCATGTCAGTTAGTGGAAATGGTTTACTTTGTGGGGGTGTAGTGGAACTAAAACTACCACCATGTCCAACCACAAAAAGTGGTAAACACCATTCTTCAAAGCTCACAATTACAATTGCTTCTGTAATTGGAAGTCTACTCTTGTTGTCATCCCTTCTTACCATTTTGTGGGTGTTCAAATCCAAGACAAAATCATGCCTTACCCAATCCACAATTGAGCATCTCCCAAATGTTTCTTATAGAACACTCCATCAAGCTACTGAGGGATTCTCTCCCAATTACTTGATAGGCTCTGGCAGTTTCGGGTTAGTATACAGAGGAAATCTCAATTCAGAAAGAGAAGTTGCAGTGAAAGTTCTCAAACTTCAAAAGCAAGGAGCTTCCAAGAGTTTCATAGCTGAATGTAACGTATTAAGAAATGTTCGGCATCGCAATCTTGTGAATATCTTAACTTGTTGCTCAAGCACAGATTACAATGATAATGAGTTCAAGGCTTTGGTTTTTGATTTCATGGAAAATGGGAGCTTAGATCAGTGGCTGCATTTAGATATTGATTGTGAGAATGGATCATCAAGAATGTTGAACTTCCTTCAGAGGCTAAATATAGCCATAGATGTTGCTTCTGCATTGCATTACCTTCATGACCAATGTGAATCACCTATTGTTCACTGTGATTTAAAGCCAAGTAATGTCCTTCTTGACAAGGATATGGTTGCTCATGTGAGTGATTTCGGTTTGGCAAGACTACTCTCGGCGACCGATAATATGCCACAAAACCAAATCAGTTCAATTGGGATAAAGGGAACCATTGGCTATGCTGCACCAGAGTATGGAATGGGAGCTGAAGTGTCAACTAAAGGAGATGTCTATAGCTTTGGTATCTTGATGCTAGAGATGTTCACAGGAAAAAGACCGACTGATAATATTTTCAGAGGAGACTTGAACCTTCATATGTTTGCAAAACAAGCTTTGATGGGAGATCTTGTTCAAATTGTGGACCCTACATTACACCAAACAGATATTAACTATGTTGAACATTGCATCCTTCAAGTTTTCAGAATTGGAATTGCATGTGCAGAGGAATCTCCAGGAGAGAGAATGGATATGGGAGATGTAGTGAAGGAAGTGGAAATGGTGAAGaatgattttcttggtagaGGAAGGAGAATGGATCAGAGGCACTAG 3048 0.3865 MAHTPQRLPQIFHLILVFSVSSLWLQPKPTHVSAVFTNETDMSALLKVKESIEKDPKGVLSSWNHSLHFCKWRGVTCGTRHPRVIALDLQGHDLRGSISPYIGNLSFLRFLDLGKNTFHGRIPSEIGHLFRLRWLMLSNNTLGGEIPFNLTKCLRLRSLYLSWNQLTGAIPFEIESLKNLERLSVSRNHLTGNIPPSLGNLSSLQGFAAAGNNLEGSIPGELGGLKSLSFLLIELNNFSGKIPLSLYNLSSIVEFSVAYNHLEGVIPNNIGDCFPKLEAITYGGNNFFGEIPVSFSNISQLRVLDLFDNNFVGNVPGNLGKLGNLWWLGLAKNHLGSNSTSDLHFITSLANCSILEILDLPSNNFGGRLPNDIANLSTKLSWFDLHSNNIIGNIPEGIGNLVNLSTLTLSYNLMRGNIPSSLGNLRDMGILDLSSNGLFGQIPISIGNLSKLVELYLNHNNLEGKIPSSIGNCKNLQIWDVSENKLSEDIPLQVFGLSSLSKLLNLSSNYFTGSLPQEISNLHNIDALDLSKNHLSGEIPSAIGGCLSLEFLYLQENFFEGKIPSSLSSLKGLLVLDLSQNNLSGEIPKNLVKLPPSMNLNLSFNNLEGEVPVKGVFSNASAMSVSGNGLLCGGVVELKLPPCPTTKSGKHHSSKLTITIASVIGSLLLLSSLLTILWVFKSKTKSCLTQSTIEHLPNVSYRTLHQATEGFSPNYLIGSGSFGLVYRGNLNSEREVAVKVLKLQKQGASKSFIAECNVLRNVRHRNLVNILTCCSSTDYNDNEFKALVFDFMENGSLDQWLHLDIDCENGSSRMLNFLQRLNIAIDVASALHYLHDQCESPIVHCDLKPSNVLLDKDMVAHVSDFGLARLLSATDNMPQNQISSIGIKGTIGYAAPEYGMGAEVSTKGDVYSFGILMLEMFTGKRPTDNIFRGDLNLHMFAKQALMGDLVQIVDPTLHQTDINYVEHCILQVFRIGIACAEESPGERMDMGDVVKEVEMVKNDFLGRGRRMDQRH 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1524 1015 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Sto5g1524 1015 SMART LRR_typ_2 129 153 IPR003591 -
Sto5g1524 1015 SMART LRR_typ_2 522 546 IPR003591 -
Sto5g1524 1015 SMART LRR_typ_2 570 594 IPR003591 -
Sto5g1524 1015 SMART LRR_typ_2 449 473 IPR003591 -
Sto5g1524 1015 SMART LRR_typ_2 401 425 IPR003591 -
Sto5g1524 1015 SMART LRR_typ_2 177 201 IPR003591 -
Sto5g1524 1015 SUPERFAMILY Protein kinase-like (PK-like) 688 1000 IPR011009 -
Sto5g1524 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Sto5g1524 1015 SUPERFAMILY L domain-like 378 633 - -
Sto5g1524 1015 ProSitePatterns Protein kinases ATP-binding region signature. 717 739 IPR017441 GO:0005524
Sto5g1524 1015 Pfam Protein tyrosine and serine/threonine kinase 717 995 IPR001245 GO:0004672|GO:0006468
Sto5g1524 1015 Gene3D Phosphorylase Kinase; domain 1 681 791 - -
Sto5g1524 1015 Pfam Leucine Rich Repeat 179 201 IPR001611 GO:0005515
Sto5g1524 1015 Pfam Leucine Rich Repeat 451 473 IPR001611 GO:0005515
Sto5g1524 1015 Pfam Leucine Rich Repeat 155 176 IPR001611 GO:0005515
Sto5g1524 1015 CDD STKc_IRAK 717 998 - -
Sto5g1524 1015 ProSiteProfiles Protein kinase domain profile. 711 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1524 1015 Gene3D Ribonuclease Inhibitor 33 97 IPR032675 -
Sto5g1524 1015 Gene3D Ribonuclease Inhibitor 98 338 IPR032675 -
Sto5g1524 1015 Gene3D Ribonuclease Inhibitor 339 652 IPR032675 -
Sto5g1524 1015 Gene3D Transferase(Phosphotransferase) domain 1 792 1007 - -
Sto5g1524 1015 SUPERFAMILY L domain-like 38 335 - -
Sto5g1524 1015 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 10 1005 - -
Sto5g1524 1015 SMART serkin_6 711 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1524 1015 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 10 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1524 Sto-Chr5 10585234 10588514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1524 36 1009 Receptor kinase-like Gene Family AT3G47570 47.931 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto5g1524 PK_Tyr_Ser-Thr 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1524 - - zju:107413838 1032.71