Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1520 ATGATAGGAGACCGCGGGTTCGACCCATTTGGGTTCGGGAAGCCGGCGGAGTACTTGCAGTTCGATTTGGACTCGCTGGACCAGAATCTGGCCAAGAACGAAGCCGGAGAGGTGATCGGAACCAGAGTGGAGACCGCGGAGGTTAAACCGACGCCGTTTCAGCCGTACGCGGAGGTTTTCGGGTTGCAGAGGTTCCGCGAGTGCGAGCTCATCCATGGAAGGTGGGCAATGCTGGGAGCTCTCGGCGCTTTGGCCGTTGAGGGTCTCACTGGGGTCGCATGGCAAGACGCTGGAAAGGTAGAACTAGAGCAAGGGGCATCCTACCTGGGGCTTCCTCTTCCATTTTCATTGACCACATTGATATGGATTGAGGTGTTCGTGATAGGCTACATTGAGTTTCAAAGAAACGCCGAACTTGACCCCGAAAAGAGGTTATACCCGGGCGGAAAGTTCTTCGATCCCCTCGGCCTAGCCAACGACCCCGAAGAGAAGGCCAGACTTCAACTTGCAGAGATCAAGCATTCCCGGTTAGCTATGGTGGTTTTCCTCATCTTTGCAATTCAAGCTGCTGTAACCGGAAAAGGCCCCATCAGTTTTCTTGCTACCTTTAACAAGTGA 618 0.5388 MIGDRGFDPFGFGKPAEYLQFDLDSLDQNLAKNEAGEVIGTRVETAEVKPTPFQPYAEVFGLQRFRECELIHGRWAMLGALGALAVEGLTGVAWQDAGKVELEQGASYLGLPLPFSLTTLIWIEVFVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKARLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFLATFNK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1520 205 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 205 IPR001344 GO:0009765|GO:0016020
Sto5g1520 205 Pfam Chlorophyll A-B binding protein 1 189 IPR022796 -
Sto5g1520 205 SUPERFAMILY Chlorophyll a-b binding protein 1 202 - -
Sto5g1520 205 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 1 205 - -
Sto5g1520 205 Gene3D Chlorophyll a/b binding protein domain 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1520 Sto-Chr5 10560726 10562378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1520 1 202 Chloroplast and Mitochondria Gene Families AT5G01530 80.198 3.42e-119 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1520 K08915 - gmx:100794604 378.637