Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1512 ATGGCCATCAACAGATCTTTGGTTTCGGTATGTCTTGTGTGGATTTTCTTTCTGTGCGCAACTATTGCTTTCTTTCAACTCAAATTGATAGAGAACGGGAGTGATTCTTCGTCTCCCATCACAACTCAGCATAACACGGGAAGCTCACTGGCAGAGGATTTGGAAGGAGTCACCCATAAAGTGTTTTTCGATGTAGAGATCGATGGGAAACTTGCGGGGTCATCTGATCCTGAAATAGATTTAAAACATCATGGTCGTATTGTCATAGGACTCTTTGGGGCAGTGGTTCCAAAAACTGTAGGAGAGAAAGGGGTTGGGAAAAGTGGAAAGCCTCTTCATTACAAAGGTAGCACATTCCATAGGATAATACCCAGCTTTATGGTTCAGGGTGGTGATTTCACCCTTGGGGATGGACGCGGTGGAGAGTCGATCTATGGTACTAAGTTTGCTGATGAAAACTTCAAACTGAAGCATACTGGGCCAGGATACTTGTCCATGGCAAATGCTGGATCAGACACCAATGGCTCTCAATTTTTTATAACAACAGTAAAAACTAGCTGGTTGGATGGACGGCATGTTGTATTTGGCAAGGTGATTTCAGGGATGGACGTTGTGCACAAGGTTGAAGCAGAAGGAAGTGGAAGTGGCCAGCCCAAAAGCAGGGTTGTTATATTAGACAGTGGCGAATTAACCTCATAa 699 0.4421 MAINRSLVSVCLVWIFFLCATIAFFQLKLIENGSDSSSPITTQHNTGSSLAEDLEGVTHKVFFDVEIDGKLAGSSDPEIDLKHHGRIVIGLFGAVVPKTVGEKGVGKSGKPLHYKGSTFHRIIPSFMVQGGDFTLGDGRGGESIYGTKFADENFKLKHTGPGYLSMANAGSDTNGSQFFITTVKTSWLDGRHVVFGKVISGMDVVHKVEAEGSGSGQPKSRVVILDSGELTS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1512 232 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 74 229 IPR002130 GO:0000413|GO:0003755
Sto5g1512 232 Gene3D - 50 232 IPR029000 -
Sto5g1512 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 91 106 IPR002130 GO:0000413|GO:0003755
Sto5g1512 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 IPR002130 GO:0000413|GO:0003755
Sto5g1512 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 162 177 IPR002130 GO:0000413|GO:0003755
Sto5g1512 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 177 189 IPR002130 GO:0000413|GO:0003755
Sto5g1512 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 190 205 IPR002130 GO:0000413|GO:0003755
Sto5g1512 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-2 41 230 - -
Sto5g1512 232 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 81 226 IPR002130 GO:0000413|GO:0003755
Sto5g1512 232 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 114 131 IPR020892 GO:0003755|GO:0006457
Sto5g1512 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 41 230 - -
Sto5g1512 232 SUPERFAMILY Cyclophilin-like 79 230 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1512 Sto-Chr5 10483726 10486025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1512 84 209 U-box Gene Family AT5G67530 43.609 6.29e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1512 K01802 - gmx:100798499 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1512 5 10483726 10486025 Sto5g1512 5 10483726 10486025 ECH