Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1505 ATGTTACACGTGTCAACGTTGTTGTCGGCGGTGGCCTACACTTCATTTCTTAATAGTTTCGTAGCTCATTCTCTCGGTTCCGGCGCCACCCTCGCCATCACCGACGACTCCGGTACCGTCTGCGGCATCGTGTCAGGTGAGCCGAACCAGCGCATTGAGTGCTACCGCCGCGGCGGCCAGATCCTCGCCGTCGAACCCAACGTTTCGTTCTCGTCGATTTCCGGCGGGAACAGTTACTTTTGCGGCCTCAGGTCCGGTAACTACAGTTTGCTCTGCTGGGACACTCTCTCTTCCAACGATACCTTGGAAACGAAGAGGCTTTACTACAATGATACTGTTTTATTGGAGAATCTCGCGGTTGGGGATACCCAAGTATGCACCACATTCGTGGGTTCCGGCACCGTCACGTGCTGGAGAACCGCCCCGGCGTTCTATTCCTCAGTTTCGGACCAATTCGCGTCTATTTCATCTGGGTCCGGCTTTTCTTGCGGGATTTTGAAGAATAACTCGCGAGTTCGATGCTGGGGAGAAGATAGCTCTGCCTCCTCCATTTCGAATTCCATTCAGAACGAGTTTGGAAACATGTCTATGCTGAGTCTTGTGGCCGGAGATTCACATGTATGCGGGTTGAATTCGAGTGGTTTTTTGGTGTGTAAAGGAAGTAATAGTTCTGGGCAGCTCGATGCTCCTCAAGGAGAGCCTCTGGAGTTTTCTGGGTTAGCTCTCGGAGCAGAGCATAGCTGTGCGATTCGGAGATCGAATGGTTCGGTGGTTTGCTGGGGAGGAAGAGGGGAATTCTCGGCGAATCTCACACGAGGAGTTTCCTTTGAAATCATCGTTTCGGGATCGAATTTCACTTGTGGATTAACGACCAGCAATTTCTCAGTCATGTGTTGGGGGCCTGGTTGGGCTAATAATACTACTACTTCGAATTCCAATCTAAGGTCAGAGCTTGAGCTTCCATTACCTCCTATTCTTCCAGGTCCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGTATATATCCTCAATCTCAAACTCTATGTTCTGGTTTTGGTAACATTTGCAAGCCTTGTGTGCCTAAAATTTTAACCCCGGCCGGGGCGCCGGCGCCGGCGTCTCCGCCTATGTCTCCTCCTTCGTCTCCGTCTCGATCCAAGACGTTGACAAGGGGTTTATTGGCATTTGCCATTGTTGGATCAATTGGTGCATTTGCTGGGATTTGTACTATAATTTACTGCTTGTGGACTGGGGTTTGTTTTGGTAACAAAAAAGTGCATAATTCTGTGCAACCCACAATCACTAGAGGAGGAAGTTCCAACAATGGTGCTAATGTAATTTCCAACAATAGTCCTCCTTCGAGATCATCGACCATTAGGCGACAAGGCTCGAGGATAATGAGGAGGCAGAGGAGTGGAACATCCTCGATGAAACACCCGGATAGGGCCGAGGAGTTCACCCTAGGCGAGCTCGTAGCAGCCACGGATAATTTTTCCTTGGAGAACAAGATTGGTGCTGGAAGCTTTGGTGTTGTGTACAGAGGAAAACTCGCCGATGGTCGCGAGGTGGCGATCAAGAGGGGCGAAACCGGATCGAAGAAGAAGATGTttcaagagaaagagagtgcATTCGAGTCGGAACTCGCATTCTTGTCCCGGTTACACCACAAGCATCTGGTTAGGCTAGTTGGGTTCTGTGAGGAGAAAGATGAGAGGCTCTTGGTGTATGATTACATGAAGAATGGAGCATTGTATGATCATTTGCATGACAAGAACAATGTGGAGAAGACTAATAGTTTCCTCAATTCTTGGAAAACAAGGATCAAGATCGCGCTAGACGCCTCTCGAGGGATCGAGTATCTCCATAACTACGCAGTTCCACCCATTATTCATAGAGACATAAAATCTTCCAACATCCTTCTCGACGCGAATTGGACAGCCAGAGTGTCCGATTTCGGATTGTCCTTAATGGGTCCGGACACCGATCAGGATTACCGGCCGACAAAAGCAGCCGGCACCGTAGGATACATCGATCCGGAATACTACGGTCTGAATGTGCTAACAGCAAAGAGTGATGTCTATGGTTTTGGAATAGTACTGCTTGAACTCTTAACAGGAAAGAGAGCCATATTCAAGGATGGTGAAAATGGAGGCACCCCAGTGAGTGTGGTGGACTTTGCAGTGCCCGCAATCATGGCCGGAGAACTCGTGAAGATTCTGGATCCGAGAGTCGGACCGCCGGAGTTAAACGAATCGGAGGCGGTGGAGCTGGTGGCATATACTGCAATGCACTGTGTGAATTTGGAAGGGAAGGATAGGCCAACAATGACAGACATAGTGGCTAATCTGGAGAGAGCTTTGGCTCTTTGTGATAGTAGTCATGGAAGCATCTCATCCAGTGGTACAATCTCTATTGTTTCAGAATGA 2424 0.4864 MLHVSTLLSAVAYTSFLNSFVAHSLGSGATLAITDDSGTVCGIVSGEPNQRIECYRRGGQILAVEPNVSFSSISGGNSYFCGLRSGNYSLLCWDTLSSNDTLETKRLYYNDTVLLENLAVGDTQVCTTFVGSGTVTCWRTAPAFYSSVSDQFASISSGSGFSCGILKNNSRVRCWGEDSSASSISNSIQNEFGNMSMLSLVAGDSHVCGLNSSGFLVCKGSNSSGQLDAPQGEPLEFSGLALGAEHSCAIRRSNGSVVCWGGRGEFSANLTRGVSFEIIVSGSNFTCGLTTSNFSVMCWGPGWANNTTTSNSNLRSELELPLPPILPGPCVQSSCSECGIYPQSQTLCSGFGNICKPCVPKILTPAGAPAPASPPMSPPSSPSRSKTLTRGLLAFAIVGSIGAFAGICTIIYCLWTGVCFGNKKVHNSVQPTITRGGSSNNGANVISNNSPPSRSSTIRRQGSRIMRRQRSGTSSMKHPDRAEEFTLGELVAATDNFSLENKIGAGSFGVVYRGKLADGREVAIKRGETGSKKKMFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYDYMKNGALYDHLHDKNNVEKTNSFLNSWKTRIKIALDASRGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMGPDTDQDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGFGIVLLELLTGKRAIFKDGENGGTPVSVVDFAVPAIMAGELVKILDPRVGPPELNESEAVELVAYTAMHCVNLEGKDRPTMTDIVANLERALALCDSSHGSISSSGTISIVSE 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1505 807 CDD STKc_IRAK 503 784 - -
Sto5g1505 807 SUPERFAMILY Protein kinase-like (PK-like) 473 782 IPR011009 -
Sto5g1505 807 MobiDBLite consensus disorder prediction 433 479 - -
Sto5g1505 807 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 10 803 IPR044815 GO:0004674
Sto5g1505 807 SMART serkin_6 497 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1505 807 SUPERFAMILY RCC1/BLIP-II 24 310 IPR009091 -
Sto5g1505 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Sto5g1505 807 Gene3D Phosphorylase Kinase; domain 1 458 577 - -
Sto5g1505 807 Gene3D Transferase(Phosphotransferase) domain 1 578 795 - -
Sto5g1505 807 MobiDBLite consensus disorder prediction 433 460 - -
Sto5g1505 807 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Sto5g1505 807 Gene3D - 195 339 IPR009091 -
Sto5g1505 807 Gene3D - 5 194 IPR009091 -
Sto5g1505 807 Pfam Protein kinase domain 498 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1505 807 ProSiteProfiles Protein kinase domain profile. 497 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1505 807 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 10 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1505 Sto-Chr5 10435991 10441509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1505 24 807 Receptor kinase-like Gene Family AT3G55950 63.067 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Sto5g1505 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1505 - - gmx:100798905 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1505 5 10435991 10441509 Sto5g1505 5 10435991 10441509 CCT
Sto9g2541 9 28011578 28014091 Sto5g1505 5 10435991 10441509 ECH
Sto5g1505 5 10435991 10441509 Sto5g1505 5 10435991 10441509 ECH