Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1493 ATGAAGGTTAAAGCTGACAGAGATGAATCTTCCCCCTACGCTGCTATGCTTGCAGCACAGGATGTTTCTACCAGATGCAAGGAACTCGGCATTACTGCTCTTCATATCAAGCTCCGTGCCACCGGAGGAAACAAGACTAAGACACCAGGTCCTGGTGCTCAGTCTGCACTCCGTGCTCTTGCTCGTTCTGGCATGAAGATTGGTCGTATAGagGATGTAACACCAATTCCTTCTGATAGCACACGCAGAAAGGGTGGTAGAAGAGGTAGAAGGCTTTAA 279 0.4839 MKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1493 92 Gene3D Ribosomal protein S11 1 92 IPR036967 GO:0003735|GO:0005840|GO:0006412
Sto5g1493 92 ProSitePatterns Ribosomal protein S11 signature. 57 79 IPR018102 -
Sto5g1493 92 Pfam Ribosomal protein S11 1 88 IPR001971 GO:0003735|GO:0005840|GO:0006412
Sto5g1493 92 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 1 92 IPR001971 GO:0003735|GO:0005840|GO:0006412
Sto5g1493 92 PANTHER BNAA05G27530D PROTEIN 1 92 - -
Sto5g1493 92 MobiDBLite consensus disorder prediction 72 92 - -
Sto5g1493 92 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 1 89 IPR001971 GO:0003735|GO:0005840|GO:0006412
Sto5g1493 92 SUPERFAMILY Translational machinery components 3 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1493 Sto-Chr5 10298716 10299280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1493 1 81 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 93.827 2.20e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1493 K02955 - cit:112495483 153.295