Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1491 ATGGAGAATTATTTGCATTattgctcttcttcttcctctgatCCTCCTTTATTTTCCCCATTGCTTCATCATCCTCATCATGTCGTCTCTGACTCGTCGTGCTCTCTTCAATTCTCTCACTTCCCTAACCCTAATTCCTCGTGGCCTCTGCTCAACGAAGAAAGAGCTGCTTCTGCTTCTAAAAGCCATAGCCAAGCCGAGAAGCGCCGTAGAGACAGAATCAATGCGCAGCTTGCCACTCTCAGAAAACTCATCCCCAAATCTGATAAGGTATTCTATTCTATTATTactctctttaatttcttctcttctgctttgggttttggctttggATTTCAGATTTGA 345 0.3507 MENYLHYCSSSSSDPPLFSPLLHHPHHVVSDSSCSLQFSHFPNPNSSWPLLNEERAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKVFYSIITLFNFFSSALGFGFGFQI 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1491 114 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 57 89 IPR036638 GO:0046983
Sto5g1491 114 PANTHER TRANSCRIPTION FACTOR BHLH30 27 91 IPR045847 GO:0003700|GO:0006355
Sto5g1491 114 PANTHER TRANSCRIPTION FACTOR BHLH51 27 91 - -
Sto5g1491 114 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 58 114 IPR011598 GO:0046983
Sto5g1491 114 Pfam Helix-loop-helix DNA-binding domain 61 87 IPR011598 GO:0046983
Sto5g1491 114 MobiDBLite consensus disorder prediction 52 71 - -
Sto5g1491 114 Gene3D - 51 96 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1491 54 91 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 65.789 3.81e-10 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto5g1491 HLH 4.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1491 - - gmx:100799687 86.6557