Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1487 ATGAATAAGGGGTACTGTGAGGGGCGTTCAAGGTCTTCTTGTGCAGCGTGCAAGCTGCTGAAGAGAAAATGCCGAGCCAAGTGTATATTCGCCCCTTACTTCCGTTCGGAGGAGTCCAAGAAATTCGCCCAAGTGCACAAGGTGTTCGGGGCCAGCAATGTGAGCAAGATCCTCTTCCAGGTCCCCGAACACCAGAGGCAAGACGCCGTCAATTCCTTGGCCTACGAGGCAGAGGCTAGGCTCAAGGACCCCGTTTATGGCTGCATTGGACCCATCGCTCTCTTGCACAACAAGATGCTCCAGCTTCACCATGACTTGGCTCTCGCTAAGGCCACTCTTGCTCATCGCgcctctgcttctgcttcttatTCTTCCCTTCATCATCATGATATCTTCAATAATTACGATAACGCCCTTAACAAACGCGTTCCCGTAGTAACCTTCGGGAATTCCCGGTTTGACCCGACTCCGAATGTTGATGCTGAACAGCAGCTTCAGTCTTTGGTTAGGAGGAAAGCCCAATGCTCTGGCCCAGCTCCTCCACACGTGACCCGCCAGTGCTTCAAACGACGTGTACGACGTCGTTTCACTCGTGGCCACCGCGATGCTCTTGAGCTCCTTCAAGCGTGCGGCGTCGAAGGTAACGGAGGTTGGTTTGAGGTGACGATCCCAAAcgggcttgggcttgggctcGACAAGGACAGAAGAACGGGCCAAGTGTGCGAAATGGTTGAGAAACTGTGCGCTTCCAATTCCGTCGCAGATGCAGTGGTTGATCCCAACGGCGAGAGCGGCGGAACCGTCGTTGAGCCACGTGAGCTGAAGCACGAGGGGAGGAGATCCGTCGAGAACGTCAGGCACGTGGAGGGAGAGGAGTTCAGTCCAGTGAGTCAGCGATTTGGGAGGCTTCTGGAAGTCCGTAGAAGAGTAAGAATCAGAGACGGCCTCGATGAAGAGCGCACCCTGGGCTCGACACACCACTTGGAGACACGAGCCATCCGGTGCGGCTCTGACCCTACCGGCGAGCGGGAAATAAGGAACCAAGGCTGTGGCCAATGCGGCTTTGAGAGAAGCGGAAAGGGAGTCCGGGGGTGGGGTGGGCCTGGGCCTGGGCCTGTAGATGAAGAGGTATTCGATGGAGAAACGAAGGAAGAGCTGAGAATCAATGGCGGAGAGAGTGAGGATAGAGGAAGGAGTAGGGTGGGAAGGAGTTATGAGGAGAGCTTGTGTGAGTCTCACAGGAGAGCTTCCCATGTGAGGAGGTTTTGGAGGAAAGGAattgaagatgatgaaggaATTGGAGGAGAAGGAGACTAG 1317 0.527 MNKGYCEGRSRSSCAACKLLKRKCRAKCIFAPYFRSEESKKFAQVHKVFGASNVSKILFQVPEHQRQDAVNSLAYEAEARLKDPVYGCIGPIALLHNKMLQLHHDLALAKATLAHRASASASYSSLHHHDIFNNYDNALNKRVPVVTFGNSRFDPTPNVDAEQQLQSLVRRKAQCSGPAPPHVTRQCFKRRVRRRFTRGHRDALELLQACGVEGNGGWFEVTIPNGLGLGLDKDRRTGQVCEMVEKLCASNSVADAVVDPNGESGGTVVEPRELKHEGRRSVENVRHVEGEEFSPVSQRFGRLLEVRRRVRIRDGLDEERTLGSTHHLETRAIRCGSDPTGEREIRNQGCGQCGFERSGKGVRGWGGPGPGPVDEEVFDGETKEELRINGGESEDRGRSRVGRSYEESLCESHRRASHVRRFWRKGIEDDEGIGGEGD 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1487 438 MobiDBLite consensus disorder prediction 376 407 - -
Sto5g1487 438 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Sto5g1487 438 MobiDBLite consensus disorder prediction 361 407 - -
Sto5g1487 438 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 137 - -
Sto5g1487 438 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 6 137 - -
Sto5g1487 438 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1487 Sto-Chr5 10240689 10245601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1487 7 126 AS2 family AT3G11090 67.769 5.75e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto5g1487 LOB 6.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1487 - - gmx:100803403 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1487 5 10240689 10245601 Sto5g1487 5 10240689 10245601 ECH