Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1484 ATGGAAAAGAGCTGGAATTTCAGTCGGTTTAGGGATCGTTGGGGACTCATGGGGTTCGTGGTGGTGTGGTTGGTCTTCCAGAGCTTGGGTCTGTGTTCGTCTTTAAATGACGAAGGTAGGGCTCTTTTGAAGTTGAGGGAGAGAATAGTTAGTGATCCTTTTGGTGCTTTGTCAAATTGGATTGATAATGAAGGAGAGCTTGACCCGTGTAATTGGTTTGGAGTTGAGTGCTTGGATGGAAGAGTGGTGGTTTTAAATTTGAAAGATCTTTGTCTGGAAGGAACTCTGGCACCTGAGCTTGCGAGCCTTCTTCATGTAAAGTCCATTATTTTGCGGAACAATTCTTTCTGTGGGATCATCCCTGAAGAAATTGTCAACTTGAAAGAGTTggaggttttggatttgggattCAACAACTTCAGTGGTTCTCTACCAGCAGATCTTGGGAGCAATATCTCACTATCAATCCTTTTGCTGGACAACAACGAGCTTCTTGGTGGGTTATCTCCTGAAATTAATGAACTGAAGATGCTTTCTGAAAGTCAAGTGGATGAAAACCAGCTAACTAGAGCAGTTAAAATGACGTCTTGTGTGGGAAGATCCATCCCATGgAATGTTGGCCAAGATAGAGTAGGTCTTCGGAGACTACTGCAATCTAGACATGATGTTCGTAATCGTGAAGCCAGTCCAACTCTTGTTAGCCCTGCTCCATCCCCTTCAACCCACCCTCCATCAGCTTCCCCATCTCCATCAGCAACGCCACCAATAATGCCAAATCCAGCTTCCCCAGACAACAATACTTCGGCATCTCCTTCTCTTTCTCCCCAGTCTTCCTCAAAGAAAAGTAATGTTGGAATTTTGGTTGGAGGTATAGGTGGTGGTGTATTCCTTGTTATTTTAGTCCTTGGCACATACCTCTGTAAAACCAGTAAAGTAGCTACTGTAAAACCTTGGGCAACAGGACTAAGTGGACAGCTTCAGAAGGCATTTGTGACTGGTGTGCCAAAGCTAAAGAGGTCAGAGCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGTAATTCACCTATTGGAACAGTGTACAAAGGGACTTTATCTAATGGAGTTGAAATTGCTGTAGCATCTGTTACAGTGACATCGTCCAAGGATTGGTCAAAGGCTTTAGAAGTGCAGTTTAGAAAAAAGATTGATACATTATCAAAATTGAACCACAAGAATTTTGTCAACCTACTTGGAtattgtgaagaagaagagccTTTCACTAGAATGATGGTTTTTGAATATGCACCTAATGGGACACTCTTTGAGCATTTACACATACAAGAAGCAGAGCAGTTGGATTGGGCAACAAGACTCAGAATTGCAATGGGCATGGCTTATTGCATGCAACACATTCACCAATTGGACCTTCCAATAGTCCTTACCAAGATGGACTCTTCCACTGTCTTTCTTACCGAGGACTACGCAGCGAAAATGTCAGATtttagtttcttgaatgagATAGCTTCATCTGAGATGAAGACCAAGGGCACAAAACACACTGATGCTCCATTAGCAAGCCTAGAAAGCAACGTTTATAGCTTCGGTGTTCTATTATTTGAAATGGTAACAGGTAGAATCCCTTATTCAGTTGACAACGACACACTAGAAGACTCCATGTCAGACTATTTACAAGGAGACAGTCCCTTGAAAGAAATGGTGGATCCAACTCTAGCCTCTTTTGATGAAGAGAAGCTAGAACAAGTAGCTGAATTGATCAAATCTTGTGTTCATGCTGACCCAAAGCAAAGACCAACAATGAAAGAAGTGAGTGTGAGGCTGAGAGAGATAACAAATTTAACACCTGATGCAGCAGTGCCTAGACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTTGTTCTGCAGATGCAAGCTAA 1920 0.412 MEKSWNFSRFRDRWGLMGFVVVWLVFQSLGLCSSLNDEGRALLKLRERIVSDPFGALSNWIDNEGELDPCNWFGVECLDGRVVVLNLKDLCLEGTLAPELASLLHVKSIILRNNSFCGIIPEEIVNLKELEVLDLGFNNFSGSLPADLGSNISLSILLLDNNELLGGLSPEINELKMLSESQVDENQLTRAVKMTSCVGRSIPWNVGQDRVGLRRLLQSRHDVRNREASPTLVSPAPSPSTHPPSASPSPSATPPIMPNPASPDNNTSASPSLSPQSSSKKSNVGILVGGIGGGVFLVILVLGTYLCKTSKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGNSPIGTVYKGTLSNGVEIAVASVTVTSSKDWSKALEVQFRKKIDTLSKLNHKNFVNLLGYCEEEEPFTRMMVFEYAPNGTLFEHLHIQEAEQLDWATRLRIAMGMAYCMQHIHQLDLPIVLTKMDSSTVFLTEDYAAKMSDFSFLNEIASSEMKTKGTKHTDAPLASLESNVYSFGVLLFEMVTGRIPYSVDNDTLEDSMSDYLQGDSPLKEMVDPTLASFDEEKLEQVAELIKSCVHADPKQRPTMKEVSVRLREITNLTPDAAVPRLSPLWWAELEICSADAS 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1484 639 SUPERFAMILY L domain-like 35 191 - -
Sto5g1484 639 MobiDBLite consensus disorder prediction 236 261 - -
Sto5g1484 639 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1484 639 Pfam Protein tyrosine and serine/threonine kinase 350 606 IPR001245 GO:0004672|GO:0006468
Sto5g1484 639 Pfam Leucine rich repeat N-terminal domain 36 77 IPR013210 -
Sto5g1484 639 MobiDBLite consensus disorder prediction 262 280 - -
Sto5g1484 639 MobiDBLite consensus disorder prediction 224 280 - -
Sto5g1484 639 SUPERFAMILY Protein kinase-like (PK-like) 330 608 IPR011009 -
Sto5g1484 639 Gene3D Ribonuclease Inhibitor 34 212 IPR032675 -
Sto5g1484 639 PANTHER BNAA09G55080D PROTEIN 1 639 - -
Sto5g1484 639 Gene3D Transferase(Phosphotransferase) domain 1 430 619 - -
Sto5g1484 639 PANTHER PROTEIN MALE DISCOVERER 2 1 639 - -
Sto5g1484 639 Gene3D Phosphorylase Kinase; domain 1 319 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1484 Sto-Chr5 10213302 10216934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1484 11 610 Receptor kinase-like Gene Family AT5G16000 27.083 3.59e-47 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Sto5g1484 PK_Tyr_Ser-Thr 1.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1484 - - gmx:100807163 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1484 5 10213302 10216934 Sto5g1484 5 10213302 10216934 CCT
Sto5g1484 5 10213302 10216934 Sto5g1484 5 10213302 10216934 ECH