Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1482 ATGTCGGAGATAGAGAGGCTAGTGGAGGTATGCGAGCCAGAAATCCGAATAGACTTCGCCCTTAACTGCAAATGCCGAGCCACGGTGCGTCTCAGATCTCTCTGCGCCACCTCACCCGTAGCCTTCAAGATCCAAACCTCCTCACCCAACAAGTTCCTCGTTAACCCACCCTGTGGACTCATCTCCCCTTCCTCCTCCGCAACCTTCCAAGTCATCCTCAAGCCTCAGTCCCAACTTCCCCCAACCTACCCTCGCTCTCCCTCCGATCGCTTCCTCATCAAAACCGCCGAGTTCCTCCCCAACTCTTCCGCCGCCGCCTCTTCCACTCGCCCCGATTCCATCAATTCCTGGTTCGCCTCCCTCTCTGACGCATCTCCCACTCACAATCTCAAACTCAAGGTAGCCTTCGTAGGTCCCGTCCTTCTGCGCGACGCTGTCTCGCGCGGCGATTTAGATGCCGTCAGGAACTTCGTCAAACGGCAGAGATCCGTGCTCGCTGATCTGTCGTTTGATGAATCCGAGTCACTCCTCCGAGTCGCCACCGAGTTGGTTAACCCGGACGCTATGGTTCACTTGCTGTTGGAAGCAGGGTTGAGGGTAGAAGAAGAGCCGTTGTTGAGATCGGAAAACTCGAACCCCCATGTGGTGGTCGACCCGAGGTGGGCTTCCAAGGGCTGGGATGAGTTACACGTGGCGGCGGCTTTTGATCGAACGGATGAGGTCCTTGTATtgtcgaagaagaagaagacattgGGGACGCTAGATTCCAGAGATCACAAGGGTAGGACCGCTTTGCATTTGGCAGTGGAGAAGGGAAGTATCGGGTGCGCGCGCGTGCTGGTGGAAGCCGGCGCCGATAAGGATGGAAGGTGCAACGACGGCGGCACACCGTTGCTTAGGGCTGCGGCGAATGGTGACCGTCGGATGGTGGAAATGTTGATTGAGATGGGCGCTGATCCTACAATAAGCGACGATCGTGGCCTTTCATCCATTGACATTGCACGTGATGAAGGACATGTGAGTGCATCCTTTCATTTTTTGTCATCTTATATGCAAAAAGAGGTAGTGGAGATAATGGAGCAAGGAGAAGAAGTAGTAGCAGCTGCAAGACATGGAGATGTGAAGAAACTGGAGTCCCTACTGAAGAGGGGAGGAAGTGTGTATTACAAGGATCAATATGGTTTAACAGCACTTCATGCGGCCGCCATGAAAGGCCACAAAGATGTGGTATTGATGCTTTGTGAAGCTGGAGTCGACTTGGAATCTCAGGACGTGGAAGGTCACGCGCCGCTGCACATGGCGGTGGAAGGTGGCGATGAAGACACCATACAAGTTTTGGTGAAGAAGGGAGTGAATGTTAATGCTCAGAACAAGAAGGGTGCAACACCTTTGTATTTGGCTAGGATTTTGGGATATAATGGCATAGCTCAATTTCTTGTCAGCCAAGGAGCTGTGTCTTCTTTTCCTGTGATTTTACGCTGA 1482 0.5216 MSEIERLVEVCEPEIRIDFALNCKCRATVRLRSLCATSPVAFKIQTSSPNKFLVNPPCGLISPSSSATFQVILKPQSQLPPTYPRSPSDRFLIKTAEFLPNSSAAASSTRPDSINSWFASLSDASPTHNLKLKVAFVGPVLLRDAVSRGDLDAVRNFVKRQRSVLADLSFDESESLLRVATELVNPDAMVHLLLEAGLRVEEEPLLRSENSNPHVVVDPRWASKGWDELHVAAAFDRTDEVLVLSKKKKTLGTLDSRDHKGRTALHLAVEKGSIGCARVLVEAGADKDGRCNDGGTPLLRAAANGDRRMVEMLIEMGADPTISDDRGLSSIDIARDEGHVSASFHFLSSYMQKEVVEIMEQGEEVVAAARHGDVKKLESLLKRGGSVYYKDQYGLTALHAAAMKGHKDVVLMLCEAGVDLESQDVEGHAPLHMAVEGGDEDTIQVLVKKGVNVNAQNKKGATPLYLARILGYNGIAQFLVSQGAVSSFPVILR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1482 493 Pfam MSP (Major sperm protein) domain 37 106 IPR000535 -
Sto5g1482 493 ProSiteProfiles Ankyrin repeat region circular profile. 426 458 - -
Sto5g1482 493 ProSiteProfiles Ankyrin repeat region circular profile. 260 286 - -
Sto5g1482 493 ProSiteProfiles Ankyrin repeat profile. 393 425 IPR002110 GO:0005515
Sto5g1482 493 SUPERFAMILY Ankyrin repeat 142 484 IPR036770 -
Sto5g1482 493 Gene3D Immunoglobulins 2 140 IPR013783 -
Sto5g1482 493 PRINTS Ankyrin repeat signature 394 409 IPR002110 GO:0005515
Sto5g1482 493 PRINTS Ankyrin repeat signature 442 456 IPR002110 GO:0005515
Sto5g1482 493 ProSiteProfiles Ankyrin repeat region circular profile. 459 484 - -
Sto5g1482 493 SMART ANK_2a 393 422 IPR002110 GO:0005515
Sto5g1482 493 SMART ANK_2a 426 455 IPR002110 GO:0005515
Sto5g1482 493 SMART ANK_2a 459 490 IPR002110 GO:0005515
Sto5g1482 493 SMART ANK_2a 293 322 IPR002110 GO:0005515
Sto5g1482 493 SMART ANK_2a 137 166 IPR002110 GO:0005515
Sto5g1482 493 SMART ANK_2a 260 289 IPR002110 GO:0005515
Sto5g1482 493 Pfam Ankyrin repeats (many copies) 380 434 IPR002110 GO:0005515
Sto5g1482 493 ProSiteProfiles Ankyrin repeat profile. 293 325 IPR002110 GO:0005515
Sto5g1482 493 ProSiteProfiles Ankyrin repeat region circular profile. 293 325 - -
Sto5g1482 493 Pfam Ankyrin repeats (3 copies) 229 324 IPR002110 GO:0005515
Sto5g1482 493 Gene3D - 141 352 IPR036770 -
Sto5g1482 493 PANTHER ANKYRIN-3-LIKE 4 487 - -
Sto5g1482 493 Gene3D - 353 488 IPR036770 -
Sto5g1482 493 ProSiteProfiles Ankyrin repeat region circular profile. 393 424 - -
Sto5g1482 493 ProSiteProfiles Ankyrin repeat profile. 260 292 IPR002110 GO:0005515
Sto5g1482 493 ProSiteProfiles Major sperm protein (MSP) domain profile. 8 135 IPR000535 -
Sto5g1482 493 ProSiteProfiles Ankyrin repeat profile. 426 458 IPR002110 GO:0005515
Sto5g1482 493 ProSiteProfiles Ankyrin repeat profile. 459 484 IPR002110 GO:0005515
Sto5g1482 493 PANTHER SI:CH211-189E2.2 4 487 - -
Sto5g1482 493 SUPERFAMILY PapD-like 12 139 IPR008962 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1482 367 455 Ion Channels AT2G26650 40.449 2.43e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1482 - - qlo:115957223 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1482 5 10189730 10198840 Sto5g1482 5 10189730 10198840 ECH