Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1461 ATGGTTGGTTGGCAGATAAATAAAGCATCGATCATAATGGATGCAACAAAGTATATCGAAGAGCTAAAGCAGAAAGTAGAAAGACTGAATCAAGACGTAGCCACTACTTCAAATGACCAAAATCCTTTGCctatgGTAAGAGTAGAAAGGGTAGAAAAGGGAATGGTTATAAATGTAAATTCAGGGAAGAGTTGCCCAGGTCTGCTTGTTCCCTTATTGGAGGCCTTCGATGAGATGGGTCTCACTGTGATGGAAGCTAGGGATGATGAAGAAGGTGAGAGTATAGATGCTGAAGCAGTGAGAGAAGCAGTGGGAAGAGCAATCAAGAATTGGAGAGAGAGTAGTGATCATCAAATGTAA 360 0.4083 MVGWQINKASIIMDATKYIEELKQKVERLNQDVATTSNDQNPLPMVRVERVEKGMVINVNSGKSCPGLLVPLLEAFDEMGLTVMEARDDEEGESIDAEAVREAVGRAIKNWRESSDHQM 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1461 119 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 6 87 - -
Sto5g1461 119 Gene3D - 4 42 IPR036638 GO:0046983
Sto5g1461 119 PANTHER TRANSCRIPTION FACTOR SCREAM-LIKE PROTEIN 6 87 - -
Sto5g1461 119 Coils Coil 12 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1461 Sto-Chr5 10014578 10015157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1461 - - qsu:112018922 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1461 5 10014578 10015157 Sto5g1461 5 10014578 10015157 CCT
Sto9g2598 9 28401054 28404057 Sto5g1461 5 10014578 10015157 ECH
Sto6g0420 6 4647875 4649124 Sto5g1461 5 10014578 10015157 ECH
Sto1g2150 1 29686391 29693200 Sto5g1461 5 10014578 10015157 ECH
Sto9g2258 9 26035824 26037506 Sto5g1461 5 10014578 10015157 ECH
Sto5g4379 5 52412886 52413702 Sto5g1461 5 10014578 10015157 ECH
Sto5g1461 5 10014578 10015157 Sto5g1461 5 10014578 10015157 ECH