Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1460 ATGACGGAGCAGTACTCATTTGGTGAATTTCGAAGATGGTGCGGAGAGCAGAGATCAAtactaaacaaacaaaaagaCGAACTTGCGTTCCTCAGAACCTTCGTGGATGCGTTCAGAGCCCAAATCCACCCCGACATATTAGTCATTCCAGGCAAACACAACAATGGGCCCCCAATAGCGGCCCACAAAGCCCTCCTGGCCACGAGATCAGAAATCTTCAAGAACATGCTGGAGTCGGACGAGTGCATCAAAGCGGAGGCAAACAAGAGCATCACAATACCCGAAATGGGGCGGGAAGAGGTAGAGTGCCTTCTGGAGTTCCTGTACGATGGGAAGTTGAGCCCAGAGAAGTTGGAGAAGCACGTGTACGCTTTGTCTCTAGCGGCTGATAAATACGATATAGCATACTTGGGGAAGGTGTGCGAGAAATATATGGTGACTTCATTGAGCATCGGTAATGCGCTTGATGTGTTGGAGATTGCGGACACGTGTCACAACGCGGAGTTGAAGGAGAGTACTATGAAGTTCTTGGTTCATAATATTGGTGACGTGGTTTTGTCGGATAGgtCATGTGGTTTCTATGGATCAAATCCATTTTCACAGTCTAATATCGAGGTTGAAATTATGttgatatatttttcttttggtaGGATATGA 657 0.446 MTEQYSFGEFRRWCGEQRSILNKQKDELAFLRTFVDAFRAQIHPDILVIPGKHNNGPPIAAHKALLATRSEIFKNMLESDECIKAEANKSITIPEMGREEVECLLEFLYDGKLSPEKLEKHVYALSLAADKYDIAYLGKVCEKYMVTSLSIGNALDVLEIADTCHNAELKESTMKFLVHNIGDVVLSDRSCGFYGSNPFSQSNIEVEIMLIYFSFGRI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1460 218 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 8 198 IPR044784 -
Sto5g1460 218 Gene3D Potassium Channel Kv1.1; Chain A 15 146 IPR011333 -
Sto5g1460 218 CDD BTB_POZ_ZBTB_KLHL-like 46 132 - -
Sto5g1460 218 Pfam BTB/POZ domain 56 148 IPR000210 GO:0005515
Sto5g1460 218 Gene3D - 147 188 - -
Sto5g1460 218 SMART BTB_4 44 149 IPR000210 GO:0005515
Sto5g1460 218 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 8 198 - -
Sto5g1460 218 ProSiteProfiles BTB domain profile. 44 117 IPR000210 GO:0005515
Sto5g1460 218 SUPERFAMILY POZ domain 30 148 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1460 Sto-Chr5 10011091 10012688 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Sto5g1460 BTB 3.8e-18 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1460 K10523 - gmx:100777561 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1460 5 10011091 10012688 Sto5g1460 5 10011091 10012688 ECH