Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto5g1454 | ATGTCCAGAGAAAGGGAAAATTTTGATGAGATAGGGAAGAAGATCAAGAGGGAAGGTGATGTATCTTGGGGAATGGGAAGAAGACACATGCTAGGCCCTCCCGGAACCCTAAATACCATAACCCCTTGTGCAGCATGTAAGCTCTTGAGacgaagatgtgcccaagaatGTCCCTTTTCTCCCTATTTTTCCCCTCACGAGCCACAAAAGTTTGCTTCTGTCCACAAAGTCTTCGGTGCTAGCAACGTCTCCAAGATGCTCATGAGCCAAAGAGCAGATGCAGCAAATAGTCTAGTGTATGAGGCAAATGTGAGGCTAAGAGATCCAGTGTACGGATGCATGGGTGCAATTTCTGCTTTGCAACATCAAGTCCAATCTTTACAAGCTGAACTTAATGCAGTAAGGGCTGAAATACTTAAATACAAACTTAGGGAAGCTACTTCTACTACTAACATCATATCCTCCTCTCATCTTCATCATATTCCTCCTCCAATCCTCCCTAATAATTCTTCTGGGGCTGCAATTTCCATTGCTGTTccgccgccaccaccaccaccaccaccaccgcctcTGCCGCCTCCTACTTCTAATTCCTCTTCTTCCATGTACACCCAACTCCAACACAGGGTTCCCACCAATAATTATACCACTATTTCAAGTGATCATATTAATTcctattttggttaa | 687 | 0.3901 | MSRERENFDEIGKKIKREGDVSWGMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMSQRADAANSLVYEANVRLRDPVYGCMGAISALQHQVQSLQAELNAVRAEILKYKLREATSTTNIISSSHLHHIPPPILPNNSSGAAISIAVPPPPPPPPPPPLPPPTSNSSSSMYTQLQHRVPTNNYTTISSDHINSYFG | 228 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto5g1454 | 228 | Coils | Coil | 117 | 144 | - | - | |
Sto5g1454 | 228 | MobiDBLite | consensus disorder prediction | 177 | 196 | - | - | |
Sto5g1454 | 228 | MobiDBLite | consensus disorder prediction | 172 | 204 | - | - | |
Sto5g1454 | 228 | PANTHER | LOB DOMAIN PROTEIN | 25 | 227 | - | - | |
Sto5g1454 | 228 | ProSiteProfiles | LOB domain profile. | 41 | 138 | IPR004883 | - | |
Sto5g1454 | 228 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 25 | 227 | - | - | |
Sto5g1454 | 228 | Pfam | Lateral organ boundaries (LOB) domain | 42 | 135 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto5g1454 | Sto-Chr5 | 9971457 | 9972427 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto5g1454 | 1 | 152 | AS2 family | AT2G30340 | 66.265 | 1.44e-71 | 217 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Sto5g1454 | LOB | 1.7e-36 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto5g1454 | - | - | gmx:100790799 | 286.189 |