Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1439 ATGACATTCAAGCGAAGGAATGGTGGACGCAACAAGCATGGCCGTGGTCATGTGAAATTCATTCGATGCTCCAACTGTGGCAAATGCTGCCCAAAGGACAAGGCAATCAAGAGGTTCCTTGTGAGGAACATTGTTGAGCAAGCCGCAGTCAGAGATGTGCAGGAAGCCTGTGTCTATGAACAATACACGCTCCCAAAGCTGTATGTGAAGATGCAGTATTGTGTTTCCTGTGCTATTCATTCCCATGTTGTGAGAGTTCGTTCTCGCACTGATAGGAGGAACCGTGAGCCACCACAGCGCTTCATCAGGCGCAGGGATGATGCACCAAGGCCTGGTCAACCTGGTCAAGCACCTCGTCCTGCTGGAGCACCAGTTGCTGCCCGTACCTAA 390 0.5128 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDAPRPGQPGQAPRPAGAPVAART 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1439 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Sto5g1439 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Sto5g1439 129 MobiDBLite consensus disorder prediction 86 129 - -
Sto5g1439 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Sto5g1439 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 126 - -
Sto5g1439 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 126 IPR000892 GO:0003735|GO:0005840|GO:0006412
Sto5g1439 129 MobiDBLite consensus disorder prediction 89 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1439 Sto-Chr5 9882444 9884164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1439 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 84.483 8.78e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1439 K02976 - gmx:100784958 209.534