Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1433 ATGTCGTTTCCCAACCACCACCCCTTCCCCTCTCGCGGCCCCTTCCACCGCCGCGCCCAATCCGAGGGCCAATTCCGCATCCCCGACGACTTCGATCTCGATCCTGGTCCCTTCGATGGCCCCTCCATCGCCTTCGAAGATCTCGGATCCGAGGACGACCTCTTCTCTGCCTACATGGATTTTGACAAATCCGGATCCAAACAACTCCACAATGGATCTCCCGACGTCAAACCCCGCTCTTCTTCCCACACTAATAATAATGCCAATGCTGGAGCCCTTGACAATAATTCCGCCGACGCTGACAAATCAGGTGCCAGTGCTACCAGGCATCGCCATAGCAATTCCGCTGATGACACCGCCGTCTTCGAGGCCATTGAGGCTAAGAAGGCCATGGCTCCCGATAAGCTTGCTGAATTGTGGACCGTTGATCCCAAGCGAGCCAAGAGGATTCTGGCAAATCGCCAATCTGCAGCTCGTTCAAAAGAGAGGAAAGCTCGTTATGTATTAGAACTTGAGAGAAAAATTCAAACCCTTCAAACTGAAGCAACTACTCTTTCAGCtcaattaaatcttttccagAGAGATACAACTGGCTTGACTAGTGAAAATACAGAACTTAAGCTTCGGTTACAAGCTATGGAGCAACAAGCCAAGTTACGTGATGCTCTAAATGAAGCACTGAAGAAAGAAGTTGATAGGCTTAAGATTGCTACTGGAGAGGCAGTAACTCCAACTCCAGCTCAACCCTATAATATGCGAATGCAACAAATTCCATACCCTCAAGGTTCCTTCTTCTTACATCAGCCACAGCATGGGCCAGGTGAACCTCAGCCCATGCAAATGCAGCAGTTGCACCCACTCTCATCTAATGTGTCAAATCCTCAGCAGCCTATGCTTGCTGCAGCCAACCCACATGACTTGTCAGAAATGTTGCCACAGGAATCCATTGGCCAATTTCAAGGGCTTGAGATAAGCACCGGGGGTTCTCATCTTATGATGCCTGATGGTCCCTCCAGTTCTGTTAAACAAATCAGCAGTGCCTTTTGA 1047 0.4881 MSFPNHHPFPSRGPFHRRAQSEGQFRIPDDFDLDPGPFDGPSIAFEDLGSEDDLFSAYMDFDKSGSKQLHNGSPDVKPRSSSHTNNNANAGALDNNSADADKSGASATRHRHSNSADDTAVFEAIEAKKAMAPDKLAELWTVDPKRAKRILANRQSAARSKERKARYVLELERKIQTLQTEATTLSAQLNLFQRDTTGLTSENTELKLRLQAMEQQAKLRDALNEALKKEVDRLKIATGEAVTPTPAQPYNMRMQQIPYPQGSFFLHQPQHGPGEPQPMQMQQLHPLSSNVSNPQQPMLAAANPHDLSEMLPQESIGQFQGLEISTGGSHLMMPDGPSSSVKQISSAF 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1433 348 MobiDBLite consensus disorder prediction 66 103 - -
Sto5g1433 348 Coils Coil 210 230 - -
Sto5g1433 348 MobiDBLite consensus disorder prediction 1 47 - -
Sto5g1433 348 Pfam bZIP transcription factor 145 203 IPR004827 GO:0003700|GO:0006355
Sto5g1433 348 Coils Coil 161 195 - -
Sto5g1433 348 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 143 206 IPR004827 GO:0003700|GO:0006355
Sto5g1433 348 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 10 343 - -
Sto5g1433 348 PANTHER BZIP TRANSCRIPTION FACTOR 18 10 343 - -
Sto5g1433 348 SUPERFAMILY Leucine zipper domain 145 196 IPR046347 GO:0003700|GO:0006355
Sto5g1433 348 SMART brlzneu 141 205 IPR004827 GO:0003700|GO:0006355
Sto5g1433 348 MobiDBLite consensus disorder prediction 326 348 - -
Sto5g1433 348 CDD bZIP_plant_RF2 146 195 IPR044759 GO:0003700|GO:0006355
Sto5g1433 348 Gene3D - 144 197 - -
Sto5g1433 348 MobiDBLite consensus disorder prediction 332 348 - -
Sto5g1433 348 MobiDBLite consensus disorder prediction 63 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1433 Sto-Chr5 9812289 9815490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1433 8 328 bZIP Transcription Factor Family AT2G40620 52.557 1.82e-103 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto5g1433 bZIP_1 3.8e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1433 - - cpap:110819395 377.481