Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1426 ATGCGAGCATTGTTGAACATGAGAGCGCTTTCCTACTTGTTCTTGTTTCTTCTCTTAGATCCAGTGTTGGTGGTGCTTTCTGTGAACCCATCTCTCAACGATGACGTTTTGGGGCTCATAGTGTTCAAAGCTGATATACAAGATCCGAAGGGGAAGCTCGCGAGCTGGAATGAAGACGACGAGAATTCCTGTGGGTGGTTCGGTGTGAAATGCAGCCCTAGATCCAACAGAGTCATTGAGCTTAACCTCGATGGGTTGTCTCTTTCGGGTCGGATAGGTCGAGGCCTCCTCCAGTTGCAGTCTCTACGCAAGCTTTCTCTCGCCAGGAACAATCTCACTGGCAGCATAGGCCCCAACATTGCTCGGTTCGAGAACCTCCGGGTGGTCGATTTGAGTGAGAATAATCTCTCCGGCGAGCTTCCCGACGATCTTTTCCGGCAATGTGGGTCTTTAAGGGCGATTTCGTTGGCGAAGAACAAGTTCACAGGGAAGATTCCGTCTAGCTTGAGCTCTTGCTCGGCTCTTGCTGCAATTAACCTATCATTCAACCAGTTTTCGGGTTCTCTTCCTTCTGGCATTTGGACTTTGAGTGGACTTAGGTCGCTGGATTTGTCTGATAATTTGTTGGAAGGTAGGATTGAAAAGGGAATTGAAGGGATGAAGAATTTGCGAACAATTAACTTGGCCAAGAATCAGTTTTCTGGGAAGGTTCCTGATGGGTTTGGAAGTTGCTTGCTTTTGAGGTCTATTGATCTCAGTGAGAATTCTCTTTCTGGTAGCCTTCCGGAGGATATGAAGGATCTTACATTGTGTAATTATCTCAGTGTAAGTGGAAATGCTTTTTCAGGTGAGTTTCCTGCGTGGATTGGGGAGATGAAAAGCCTTGAGACATTGGACATCTCTCTGAATAGATTTTCAGGTCAGGTGCCAAGTTCTATAGGAAATCTTCAGTCGTTGAAGACAATGAACTTTTCTGGAAATGGTTTTTCTGGTAACCTGCCAGAGTCTATGATAAACTGCACAAGCCTTGTGTCCTTGGACGTTAGCCAGAATTCAATGTCAGGTGATCTTCCTTCGTGGATTTTCAAGTCAGATTTGCAGAAggttttggtgtcacaaaacaaCTTACGTGGTGGTGGAAGCCTGAAAAACCCTCTATATTCCTTGGAAGAAGTTGCGGTTCAAAGTCTTCAAGTTTTGGATTTATCTAGCAATGCATTTACTGGTGAAATTACATCTGATATCGCAGTTCTAAGCAGCTTGAAGCTCTTGAATTTATCGAAGAACACTCTAAGTGGTCCTATACCTGCTGCCGTTGGAGGAGCTGTATCTTTGAAAGAATTGAGATTGGGGAAAAACTCTCTAGTTGGGAAAATTCCAACCTCAATTGGCAACTGCTCTTCATTGTCCACTTTAGTTTTATCACAGAACAGTCTGAGTGGCTCAATACCTGCAGCAATTGCAAAACTGACTAATTTACAAGTTGTGGACTTTTCTTTCAACAACCTTACTGGAATTCTTCCCAAGCAATTGGCCAATCTGCCCAACCTTCATACCTTCAATTTATCTCACAACAACCTCGAGGGTGAACTGCCGGCTGGTCCCTTTTTCAATATCATTTCGCCTTCCTCTCTTACTGGCAATCCATTACTGTGCGGTGCTGTTGTCAAGAAATCATGCCCTTCTGTCCTTCCAAAGCCTATTGTTTTAAACCCAAACACTTCCGGTGATTATGCTCCAGGTTCACTACCCCCACATTTGGGTCACAAAAGAATCATTCTCAGCATTTCTGCACTCATTGCCATTGGTGCAGCTGCTGTCATTGTAATTGGTGTCATTGCAATCACTGTTCTGAATCTCCGTGTTCGGTCCGCTGCATCACAAGCTCCAGCTGCCCTCACATTTTCTGCAGGGGAAGAATTTAGCCATTCACCAACTACAGATGCCAACTCTGGCAAGCTTGTCATGTTTTCCGGTGAACCCGACTTCAGCACTGGAGCCCATGCTTTGCTTAACAAGGATTGTGAGCTTGGGCGTGGTGGGTTTGGAGCAGTGTACCGGACTGTTCTAAGAGATGGCCATTCAGTTGCTATCAAGAAGCTAACGGTGTCCAGTCTTGTCAAGTCCCAGGATGATTTTGAAATAGAAGTGAAGAAACTGGGAAAAATCAGACACCAAAATCTTGTAGCACTTGAAGGTTATTATTGGACTCCATCCCTACAGCTCCTCATATATGAGTATGTCTCTGGTGGTAGTCTGTATAAGCATCTCCATGATGGATCAGGCGGAAACTTCCTCTCGTGGAATGAGAGGTTTAATGTTATTCTTGGGACAGCAAAAGCCTTGGCTCACTTGCACCACTTAAACATTATTCACTACAACATCAAATCAACCAATGTCCTAATTGATAGCTATGGTGAAGCTAAAGTGGGGGACTTTGGCCTAGCAAGATTGTTACCAATGCTTGACCGCTATGTTTTGAGCAGCAAAATTCAAAGTGCACTTGGTTACATGGCACCCGAGTTTGCCTGCCGAACTGTGAAGATAACAGAGAAATGCGACGTATATGGATTTGGAGTTCTGATTTTGGAAGTAGTCACAGGGAAGAGGCCAGTGGAATACATGGAAGATGATGTGGTTGTACTTTGTGACATGGTCAGAGGAGCTTTGGAAGAAGGCAAGGTGGAGGAATGCATCGATGGGAGGCTGCAGGGGAAGTTCCCGGCAGAAGAAGCCATTCCTGTGATGAAGCTAGGCTTAATATGTACTTCACAAGTGCCGTCGAACCGGCCGGACATGGGAGAGGTAGTTAATATATTGGAGCTTATAAGATGTCCCTCAGAAGGACAGGAGGAGCTGGGATGA 2865 0.4485 MRALLNMRALSYLFLFLLLDPVLVVLSVNPSLNDDVLGLIVFKADIQDPKGKLASWNEDDENSCGWFGVKCSPRSNRVIELNLDGLSLSGRIGRGLLQLQSLRKLSLARNNLTGSIGPNIARFENLRVVDLSENNLSGELPDDLFRQCGSLRAISLAKNKFTGKIPSSLSSCSALAAINLSFNQFSGSLPSGIWTLSGLRSLDLSDNLLEGRIEKGIEGMKNLRTINLAKNQFSGKVPDGFGSCLLLRSIDLSENSLSGSLPEDMKDLTLCNYLSVSGNAFSGEFPAWIGEMKSLETLDISLNRFSGQVPSSIGNLQSLKTMNFSGNGFSGNLPESMINCTSLVSLDVSQNSMSGDLPSWIFKSDLQKVLVSQNNLRGGGSLKNPLYSLEEVAVQSLQVLDLSSNAFTGEITSDIAVLSSLKLLNLSKNTLSGPIPAAVGGAVSLKELRLGKNSLVGKIPTSIGNCSSLSTLVLSQNSLSGSIPAAIAKLTNLQVVDFSFNNLTGILPKQLANLPNLHTFNLSHNNLEGELPAGPFFNIISPSSLTGNPLLCGAVVKKSCPSVLPKPIVLNPNTSGDYAPGSLPPHLGHKRIILSISALIAIGAAAVIVIGVIAITVLNLRVRSAASQAPAALTFSAGEEFSHSPTTDANSGKLVMFSGEPDFSTGAHALLNKDCELGRGGFGAVYRTVLRDGHSVAIKKLTVSSLVKSQDDFEIEVKKLGKIRHQNLVALEGYYWTPSLQLLIYEYVSGGSLYKHLHDGSGGNFLSWNERFNVILGTAKALAHLHHLNIIHYNIKSTNVLIDSYGEAKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLILEVVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEECIDGRLQGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELG 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1426 954 Gene3D Ribonuclease Inhibitor 285 381 IPR032675 -
Sto5g1426 954 Gene3D Phosphorylase Kinase; domain 1 664 747 - -
Sto5g1426 954 SUPERFAMILY Protein kinase-like (PK-like) 675 938 IPR011009 -
Sto5g1426 954 SUPERFAMILY RNI-like 104 533 - -
Sto5g1426 954 ProSitePatterns Protein kinases ATP-binding region signature. 677 700 IPR017441 GO:0005524
Sto5g1426 954 Gene3D Ribonuclease Inhibitor 382 560 IPR032675 -
Sto5g1426 954 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 431 952 - -
Sto5g1426 954 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 440 - -
Sto5g1426 954 ProSiteProfiles Protein kinase domain profile. 671 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1426 954 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 9 440 - -
Sto5g1426 954 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 431 952 - -
Sto5g1426 954 Gene3D Ribonuclease Inhibitor 191 284 IPR032675 -
Sto5g1426 954 Gene3D Ribonuclease Inhibitor 33 190 IPR032675 -
Sto5g1426 954 Pfam Protein tyrosine and serine/threonine kinase 673 939 IPR001245 GO:0004672|GO:0006468
Sto5g1426 954 SMART LRR_typ_2 292 316 IPR003591 -
Sto5g1426 954 SMART LRR_typ_2 99 122 IPR003591 -
Sto5g1426 954 SMART LRR_typ_2 196 219 IPR003591 -
Sto5g1426 954 SMART LRR_typ_2 418 442 IPR003591 -
Sto5g1426 954 SMART LRR_typ_2 123 147 IPR003591 -
Sto5g1426 954 SMART LRR_typ_2 514 538 IPR003591 -
Sto5g1426 954 SMART LRR_typ_2 220 244 IPR003591 -
Sto5g1426 954 SMART LRR_typ_2 490 513 IPR003591 -
Sto5g1426 954 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Sto5g1426 954 PRINTS Leucine-rich repeat signature 247 260 - -
Sto5g1426 954 PRINTS Leucine-rich repeat signature 418 431 - -
Sto5g1426 954 Gene3D Transferase(Phosphotransferase) domain 1 748 952 - -
Sto5g1426 954 Pfam Leucine rich repeat 125 185 IPR001611 GO:0005515
Sto5g1426 954 Pfam Leucine rich repeat 468 527 IPR001611 GO:0005515
Sto5g1426 954 CDD STKc_IRAK 677 943 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1426 Sto-Chr5 9757472 9760904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1426 13 954 Receptor kinase-like Gene Family AT3G56370 67.113 0.0 1248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Sto5g1426 PK_Tyr_Ser-Thr 1.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1426 - - gmx:100791629 1412.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1426 5 9757472 9760904 Sto5g1426 5 9757472 9760904 ECH