Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1424 ATGGATAGTGGGGTTATTCCCCATGTGTTAGCTGTTGATGACAACCTCATTGACCGCAAACTCGTTGAGAAGCTCCTAAAAAATTCTTCTTGCAAAGTGACAACTGCAGAAAATGGGCCAAGGGCATTAGAGTTTCTGGGGTTGGCAAGTGATGAACAGAACAAAAACTTGAAGGGCACTACTATAAGTAATgggtCCAAAGTGAATATGATTATCACAGACTATTATATGCTTGGGATGACAGGATATGAGCTACTCAAGAAAATTAAGGAATCATCAATCATGAAGGAGGTTCCAGTGGTGATAATGTCATCTGAGAACATACCAACTTGGATTAACAAGTGTTTGGAGGAAGGAGCTCAGATGTTCATCCAAAAGCCTCTCAAACAATTTGATGTAAAGAAACTGACATGTAAGCTAATGAACTGTAGAGGCTAA 438 0.3904 MDSGVIPHVLAVDDNLIDRKLVEKLLKNSSCKVTTAENGPRALEFLGLASDEQNKNLKGTTISNGSKVNMIITDYYMLGMTGYELLKKIKESSIMKEVPVVIMSSENIPTWINKCLEEGAQMFIQKPLKQFDVKKLTCKLMNCRG 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1424 145 SMART REC_2 7 137 IPR001789 GO:0000160
Sto5g1424 145 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 143 IPR045279 GO:0009736
Sto5g1424 145 SUPERFAMILY CheY-like 8 141 IPR011006 -
Sto5g1424 145 ProSiteProfiles Response regulatory domain profile. 8 141 IPR001789 GO:0000160
Sto5g1424 145 CDD REC_typeA_ARR 9 136 - -
Sto5g1424 145 Pfam Response regulator receiver domain 9 133 IPR001789 GO:0000160
Sto5g1424 145 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 6 143 - -
Sto5g1424 145 Gene3D - 6 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1424 Sto-Chr5 9735374 9736203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1424 8 144 Response Regulator Gene Family AT3G56380 71.739 4.00e-63 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto5g1424 Response_reg 9e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1424 K14492 - gmx:100499827 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1424 5 9735374 9736203 Sto5g1424 5 9735374 9736203 ECH