Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1420 ATGATGGATGAGGGCATTGGTGGATTAATAGAGAGAGCTTGTGAGTTAGCTAGAAACCTTGAATGGAGTTACACTAACAACCAAGGGGACGACGTCGTGTTGAGGTGTATCGATGAGATACTCGACACACTTAACGGTGCTAGACAGAGGTTAACGACGTCGTCGGTGGTAATAACGGCGGGAGCATCATCCCATCATCGTGACCAAGCTTTGACGACGTCGTATCATCAGTTGATTCAaatgcagcagcagcagcaggtGGTTCGAGCAGCGAGGAATACGACGCCGTCTAGGGGTGGGAGTATTGGGAGAGAAGAGAAGAGGACAGTGATGGTTCCAGCTCCTCAGTACGGGAACACAGAGATGCCACCAGACGATGGCTACACATGGAGAAAATATGGCCAGAAAGAGATCCTTGGCTCCAATTACCCAAGGGCTTACTATAGATGCACCCACCAAAAACTATACGAGTGTCCAGCGAAGAAGCAAGTGCAACGCCAAGATAACAACCCAGACATATTTGCAATCACGTACCGAGGTGACCACACGTGCCACATGTCATCCACTGCTCCATCATCGTCCGTACCACCACCTCCTCAGCTTCTACCCTTAGATCTCTCTCCTCCTActattactactactactactattgCTTCTCCATCTTCCACTTCTGCTTCTGTCTCCCACTGGCTCTCCTCCGTCCAACTCAGCCTCCTCGGTCCGGATGCGGCCGCCGGGCCGTCCGCCTCGAGGTTTGGCGGGGCGGATAATTACCCGGTGGTGGATATGGCGGATGCTATGTTCAATTCCGGATCTAGCAGTGGTAATAGTATGGAGTCTCTCTTCCCTCCAGCTGAGGGTGCTGCTACTAAATGGGAAACGGGTGAtgacaagaaaattaattag 906 0.4834 MMDEGIGGLIERACELARNLEWSYTNNQGDDVVLRCIDEILDTLNGARQRLTTSSVVITAGASSHHRDQALTTSYHQLIQMQQQQQVVRAARNTTPSRGGSIGREEKRTVMVPAPQYGNTEMPPDDGYTWRKYGQKEILGSNYPRAYYRCTHQKLYECPAKKQVQRQDNNPDIFAITYRGDHTCHMSSTAPSSSVPPPPQLLPLDLSPPTITTTTTIASPSSTSASVSHWLSSVQLSLLGPDAAAGPSASRFGGADNYPVVDMADAMFNSGSSSGNSMESLFPPAEGAATKWETGDDKKIN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1420 301 MobiDBLite consensus disorder prediction 269 301 - -
Sto5g1420 301 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g1420 301 SUPERFAMILY WRKY DNA-binding domain 121 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto5g1420 301 ProSiteProfiles WRKY domain profile. 125 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g1420 301 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 215 IPR044810 GO:0003700
Sto5g1420 301 Pfam WRKY DNA -binding domain 125 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g1420 301 Gene3D WRKY domain 113 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto5g1420 301 PANTHER WRKY TRANSCRIPTION FACTOR 55 11 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1420 Sto-Chr5 9715430 9717945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1420 90 283 WRKY Transcription Factor Family AT2G40740 43.814 6.50e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto5g1420 WRKY 1.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1420 - - gmx:100786198 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1420 5 9715430 9717945 Sto5g1420 5 9715430 9717945 ECH