Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1417 ATGCTTAGAAGCAGAACACATCCATTGCTCGCCCTCAGGATGCTGTCACCATCCTCACCATCGTCCTCCGCTCCATGTGATACTAAACTACCTTCAATTTTCAGATCCTCTTCTCCAAATTccaaattctctctctctcaacttcctcctcctcctttatTCTCCAACTCTGGAAATACCCCTCGAAGAATGACGCTTTCAAGATGCTGTTCTGGGGTTAGTAGCCCCATACCCATATCCGGAAAACCAGATACTAAAGGACCAGAACCCGATTCCGATGACCCTCAGAGTCTCCTCGTCGTCTCCTTCTACAAGTTCGCGGATTTCCCTGACCATGCACATATGAGGAAACCCTTGAAGGGACTTTGTGAAGAACTGCATGTTTCAGGTGGTATTATTCTTGCTCCGGAAGGAATCAATGGCAGCATTTGTGGCACTCGGGAGTCAGTGGAGAAAGTTCTTGCATTTATACAAAGTGATGACCGTCTAAAGGGACTAAGACAAGTGGAATCACCTGTAAGTCCTGAGGAGGAAGCTCTTCATCATGGACATAGTGCCAGTTCTCCTCTTGCTGCAGGGGAAGATGCTCCCTTTAGATGGGATCACGTGAGGGTTAAGTTGAAGAAAGAGATTGTTACGCTTGGGATGCCTACTGTATCACCTATCGAAAGAGTTGGAAAATATGTTAGCCCAGAAGAGTGGAATGCTTTGATTAGTGATCCAGATACAgtGGTGATTGATGTGCGGAACGACTATGAGACCAGAATAGGAAAGTTTAAAGGAGCAGTTGATCCTTGTACAACATCATTCCGTGAATTCCCATCTTGGGTGGATGATCATTTCCGGCTTACTGGAATTGATTGCACGCATCCAACAATTGAAGTGAACAATTCAGGCGAAAGTGCTGAAAAAGAAACGGAGAATCCAAAACAACCAATGCCACGTGTTGCAATGTATTGCACTGGAGGTATAAGATGTGAGAAAGCTACCAGTCTACTCCTCAGCAAAGGTTTTAAAGAGGTTTATCACTTGGAAGGTGGAATTCTGAAATATCTTGAGGAAGTTCCAAAAACAGAAAGCCTGTGGCAGGGTGAGTGCTTTGTGTTCGACAAGCGAGTCTCCGTGGACCATGGTTTGGTGCAAGGAAATTTCAAGCTTTGCTATGGTTGTAAGCAGCCGGTGAGTGATGCTGACATGGAAGCTCCAGAATTTGAATATGGAGTTTCTTGCCCGCACTGCTTTGCACAGAAATCAGATGAAGAGAAGGAGAGGGCACGAGCTCGGCAAAGACAATTTGAGAGATGGGGAATCATAGGTGGTCCGGACAAGGGTCGCCGACCGACAAGTAAACCAGACAGTAACAGTAGTAAACCTAACCAGCTTTCACATTCTATTTGA 1398 0.4428 MLRSRTHPLLALRMLSPSSPSSSAPCDTKLPSIFRSSSPNSKFSLSQLPPPPLFSNSGNTPRRMTLSRCCSGVSSPIPISGKPDTKGPEPDSDDPQSLLVVSFYKFADFPDHAHMRKPLKGLCEELHVSGGIILAPEGINGSICGTRESVEKVLAFIQSDDRLKGLRQVESPVSPEEEALHHGHSASSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTVSPIERVGKYVSPEEWNALISDPDTVVIDVRNDYETRIGKFKGAVDPCTTSFREFPSWVDDHFRLTGIDCTHPTIEVNNSGESAEKETENPKQPMPRVAMYCTGGIRCEKATSLLLSKGFKEVYHLEGGILKYLEEVPKTESLWQGECFVFDKRVSVDHGLVQGNFKLCYGCKQPVSDADMEAPEFEYGVSCPHCFAQKSDEEKERARARQRQFERWGIIGGPDKGRRPTSKPDSNSSKPNQLSHSI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1417 465 MobiDBLite consensus disorder prediction 1 94 - -
Sto5g1417 465 MobiDBLite consensus disorder prediction 451 465 - -
Sto5g1417 465 Gene3D - 89 212 - -
Sto5g1417 465 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 94 446 IPR020936 -
Sto5g1417 465 Gene3D - 213 395 IPR036873 -
Sto5g1417 465 Hamap tRNA uridine(34) hydroxylase [trhO]. 96 397 IPR020936 -
Sto5g1417 465 Pfam Rhodanese-like domain 230 353 IPR001763 -
Sto5g1417 465 Pfam UPF0176 acylphosphatase like domain 100 211 IPR040503 -
Sto5g1417 465 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 94 446 - -
Sto5g1417 465 ProSiteProfiles Rhodanese domain profile. 239 360 IPR001763 -
Sto5g1417 465 CDD RHOD_YceA 226 353 - -
Sto5g1417 465 MobiDBLite consensus disorder prediction 171 193 - -
Sto5g1417 465 MobiDBLite consensus disorder prediction 15 74 - -
Sto5g1417 465 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 208 386 IPR036873 -
Sto5g1417 465 MobiDBLite consensus disorder prediction 421 465 - -
Sto5g1417 465 SMART rhod_4 229 357 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1417 Sto-Chr5 9703691 9706956 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1417 94 465 Sulfurtransferasese or Rhodanese AT2G40760 77.128 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1417 - - gmx:100784854 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1417 5 9703691 9706956 Sto5g1417 5 9703691 9706956 ECH