Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1410 TTGCTCCACTCCTCCATTTTTGCACTTGTTCTTCTATGCTTCTTACCATGTTTCTCTATCTTGGTTATAGCTGACCTGAACTCTGATAGACAAGTTCTGTTAGAGTTTGCTTCTAGTATCCCACATGCCCGAAGACTCAACTGGAATGATTCTGCTCCAGTTTGCAGCTCATGGGTTGGTGTGACTTGCAATTCAAATGGGACTCGGGTCATTGCTATCCATCTTCCAGGGGTTGGTCTCAAAGGTCACATTCCAGAAAACAGCATAGGAAAACTAGATGCCCTTAGGGTTCTGAGCCTTCACACCAATGGTCTTAGTGGGAGTCTTCCTTCTGATATCCTCTCCATTCCTTCACTCCAATATGTACACCTCCAGCAGAATAACTTCTCTGGTCCAATCCCTTCCTCTGTCTCTCCTAAACTCATTGCTCTGAATATTGCCTTTAACTCCTTCTCTGGCACTATCCCACCTGTATTTGTGAACCTCAGGAGACTCACCTGGTTTTATTTACAAAACAATTCCATCTCTGGACCTGTCCCTGACTTCAACCTCCCAAGTCTCAAATCTCTCAATTTGAGCTATAACAACTTGAGtggctcaattccaaattccatCCAAAAATTCCCTTATACCTCTTTTGTTGGGAACTCTCTATGCGGGCCACCTCTCAATCATTGCTCTTCAATCTCCCCTTCTCCTTCTGCTTCTTCTCCTCCTGTTTACCTGCCACACTCTACACAAACTCCTCAGAATCACAAAGCTACCACCCCAAAGAAAAGATTTGGTTTAGCTTCTATACTTGCTCTAGCAATTGGGGGCTGTGCATTCCTCTCACTCCTAGTTTTGGTAATCTCTTTTTGCTGTTGTAAGAAGAAAAACGGTGAAAATAGTGGCGGCATACTGAAAGCCAAGGCGGCTTGTGCCGGAAAGACTGAGATTTCGAAGAGTTTTGGGAGTGGGGTACAAGAGGCTGAGAAGAACAAGTTGTTCTTCTTTAGAGGTTCTTACAGTTTTGACCTTGAGGATCTGCTAAAGGCCTCAGCTGAAGTTCTAGGAAAGGGAAGTTATGGAACTGCTTACAAGGCTGTTTTAGAGGAGGGAGTAACTGTGGTAGTTAAAAGGTTGAGGGAAGTTATGGtcggaaagaaagagtttgagcAGCAGATGGATATTGTGGGGAGAATCGGAAGGCACCCCAATGTCATGCCCCTTCAAGCTTATTACTATTCCAAAGATGAGAAACTTCTAGTTTCCAGCTACATACCAGGCGGCAGCTTATTTGCCTCATTGCATGGAAACAGGGGTGCAGGAGGAAGAACTCCATTAGATTGGGATTCAAGAATGAAGATAGCACTTGGAGTTGCCAAGGGAATTGCCTTCATCCACTCGGAGGGAGGTCCAAAATTCACACACGGCAACATCAAGCCCTCTAACGTCCTTCTAACCCTAGACCTCGACGCCTCCGTCTCCGACTTCGGATTGACGCCTCTGATGAACACTCCTGCAACCATGTCGAGATCCAACGGCTACCGCGCTCCAGAGGTCACCGATTCCCGAAAAATCACTCACAAATCCGATGTTTACAGCTTCGGAGTGCTCCTGCTCGAAATGCTGACGGGGAAATCCCCAATGCGATATCCTGGCCGCGACGACGCGGTGGATCTGCCACGCTGGGTTCGATCCGTCGTTCGCGAGGAATGGACGGCCGAAGTTTTCGATGAGGAGCTATTACGAGGACGATACGTGGAAGAGGAAATGGTTCAGATGCTTCAGATCGCGCTGGCGTGTGCGGCAAAGGTGCCGGATACGAGGCCGAGAATGGAAGAAGCTGTGAGAATGATAGAGGAAATCAGGCAGCCGGAGTTGAAGAACCGAACGTCGTCTGAGTCTGAGTCCAATTTGCAAACTCCTTGA 1914 0.4639 LLHSSIFALVLLCFLPCFSILVIADLNSDRQVLLEFASSIPHARRLNWNDSAPVCSSWVGVTCNSNGTRVIAIHLPGVGLKGHIPENSIGKLDALRVLSLHTNGLSGSLPSDILSIPSLQYVHLQQNNFSGPIPSSVSPKLIALNIAFNSFSGTIPPVFVNLRRLTWFYLQNNSISGPVPDFNLPSLKSLNLSYNNLSGSIPNSIQKFPYTSFVGNSLCGPPLNHCSSISPSPSASSPPVYLPHSTQTPQNHKATTPKKRFGLASILALAIGGCAFLSLLVLVISFCCCKKKNGENSGGILKAKAACAGKTEISKSFGSGVQEAEKNKLFFFRGSYSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGVTVVVKRLREVMVGKKEFEQQMDIVGRIGRHPNVMPLQAYYYSKDEKLLVSSYIPGGSLFASLHGNRGAGGRTPLDWDSRMKIALGVAKGIAFIHSEGGPKFTHGNIKPSNVLLTLDLDASVSDFGLTPLMNTPATMSRSNGYRAPEVTDSRKITHKSDVYSFGVLLLEMLTGKSPMRYPGRDDAVDLPRWVRSVVREEWTAEVFDEELLRGRYVEEEMVQMLQIALACAAKVPDTRPRMEEAVRMIEEIRQPELKNRTSSESESNLQTP 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1410 637 ProSiteProfiles Protein kinase domain profile. 345 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1410 637 SUPERFAMILY Protein kinase-like (PK-like) 349 615 IPR011009 -
Sto5g1410 637 Gene3D Ribonuclease Inhibitor 139 228 IPR032675 -
Sto5g1410 637 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Sto5g1410 637 ProSitePatterns Protein kinases ATP-binding region signature. 351 382 IPR017441 GO:0005524
Sto5g1410 637 ProSiteProfiles Leucine-rich repeat profile. 186 208 IPR001611 GO:0005515
Sto5g1410 637 Gene3D Ribonuclease Inhibitor 28 138 IPR032675 -
Sto5g1410 637 Gene3D Phosphorylase Kinase; domain 1 314 420 - -
Sto5g1410 637 PANTHER RECEPTOR-LIKE KINASE 7 636 - -
Sto5g1410 637 SUPERFAMILY L domain-like 31 210 - -
Sto5g1410 637 Pfam Protein kinase domain 349 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1410 637 CDD STKc_IRAK 351 617 - -
Sto5g1410 637 MobiDBLite consensus disorder prediction 618 637 - -
Sto5g1410 637 Gene3D Transferase(Phosphotransferase) domain 1 421 636 - -
Sto5g1410 637 PANTHER OS05G0588300 PROTEIN 7 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1410 Sto-Chr5 9658103 9660746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1410 18 618 Receptor kinase-like Gene Family AT5G58300 61.678 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto5g1410 Pkinase 1.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1410 - - aprc:113868460 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1410 5 9658103 9660746 Sto9g2633 9 28622533 28626309 CCT
Sto5g1410 5 9658103 9660746 Sto5g1410 5 9658103 9660746 ECH