Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1390 ATGTATGCAAGTGAAAGACAGTTAGTAAGAATAAGATTGGCATATCTAAGAGCAGTCCTAAGCCAAGAGATCGGTGCTTTCGATACAGAACTTACAAATGGTAAAATCATCAGTGGGATTAGCAACCACATGAGTATCATACAAGATGCTATTGGCGAGAAGTTGGGTCACTTCACTTCCTGCTTTGCAACTTTCTTTGCTGGACTTGTGATTGCTGCTATATGCACTTGGGAAATAGCACTTCTATGTTTATTCGTTGTTCCACTTATTCTTCTGATTGGGGCCACCTACACCAAGAGAATGAACACCATATCAGCTACCAAAATGATTTATCAGTCTCAAGTCACAGCTATGATAGAACAGACAATATCACATATAAAAACGGTATATGCATTTGTTGGGGAGAGTTCTGCAATGAAATCCTTCACAGAGAACATGGAGAAACTGTATATTATAAGCAAAGGAGAGGCACTAATAAAGGGAGTTGGAACAGGAATGTTCCAAACAGTGAGTTTCTGTTCTTGGGCTCTCATTGTATGGGTTGGAGCTGTTGTGGTCACAGCCAAGAGAGCAAGTGGAGGAGACGTTATTGCTGCAGTCATGAGCATTCTCTTTGGTGCCATATCTTTGACTTATGCTGCACCAGACATGCAACTATTCAATCAGGCAAAAGCAGCGGGATATGAGGTTTTCCATGTGATCCAAAGAAAGCCACTTATAAGTAATGAATCACAAGGGAAGACACCTAAGAAGATGGAAGGCTTCATTGACCTAAGAGATGTTCACTTCTCCTACCCCTCACGCCCAGAGAAACCTATTCTTCAAGGATTTTCGCTGTCGATCCCTGCAGGGAAGACCGTGGCTTTAGTTGGTAGCAGTGGGTGTGGAAAGAGTACTGTTATCTCACTGGTTTCCAGATTTTATGATCCTTCAAAAGGAGAAATTTTCATTGATCACCACAACATCAAGGATCTTGATTTGAAGTTCCTTAGAGGAAACATAGGTGCTGTTTCCCAAGAACCTTCACTCTTTACAGGCACCATCAAGGACAACTTGAAAGTGGGAAAAATGGACGCAGATGATGAAGAGATACAAAAGGCAGCAGAAATGTCAAATGCACACTCTTTCATATCACAACTTCCTGATCAGTACCTAACAGAGGTAGGACAAAGGGGTGTCCAATTATCAGGAGGCCAAAAACAAAGAGTAGCAATAGCAAGAGCCATTCTGAAAAATCCTCCCATCCTTTTGCTTGATGAGGCTACAAGTGCCCTTGACTCAGAGTCAGAAAAGCTGGTTCAAGAGGCTCTTGAGAAAGCAATGAGGGGAAGGACTGTCATCTTGATTGCACACAGGCTATCAACGGTCGTAAATGCAGATATGATTGTTGTTGTGCAGAACGGACAAGTTTCAGAGATAGGAACACATAACAGTTTGCTAGAAACAAGCACATTCTACAATGCATTATACAACATGCAGAACCTTGAACCGGTTCCTGACTTGAGTTCCAAAAATGAAATTTCAAGTGCCTACAAAGAAGATTCTTTTGAAGATATTAGACCacaagagaagaaaatagaGGTGCTAGAAATTCTCTCTGAGCATTCTATGCAAGAGGAACAGAAAAGCATAAAAGAAAGAAGTATATTTTTCAGAATCTGGTTTGGTCTAAAAAAGAGAGAGCTCGTAAAGACCGCTATTGGCGCCTTTGCAGCGGCTTTCTCTGGCATCTCAAAGCCAGTTTTTGGATTCTTCATCATCACCATTGGAGTAGCATACTTTAAAGAAAATGCAAAACGGAAAGTAGCAGTGTATTCTATTATTTTTGGTGGAATAGGGTTACTTTCATTATTTAGTCACACATTGCAGCATTACTTCTTTGGAGTAATTGGGGAAAAGGCAATGGGAAATCTCAGGCGTGCTATTTATTCAGGTGTGCTTCGCAATGAAGTAGGGTGGTTTGACAAACCTGAGAATAGTGTTGGTTCACTAACTTCACGCATCATGAGTGACACTGCCATGGTCAAAATCATAATTGCTGATCGCATGTCTGTGATAGTGCAATGCATTTCTTCTGTACTGATAGCAACAGGGGTCAGCATGTATGTTAACTGGAGAATGGGTTTGGTAGCTTGGGCTGTGATGCCATGCCACTTCATAGGCGGTCTGGTTCAAGCCAAGTCTGCCAAAGGATTCTCAGGAGACTATTCTGCTGCACATTCTGGTCTTGTTGCTCTAGCATCTGAATCCACAACCAACATAAGGACTATTGCATCCTTTTGCCATGAAGAGGAAGTAATGAAGAAAGCCAAAACATCCTTAGACATCCCGAAGAAAAAGTACAGGATAGAAAGCATCAAATATGGGATTATTCAAGGCTTCTCCCTTTGCTTATGGAACATCGCACATGCTGTGGCTTTGTGGTACACAACAATTCTGGTGGACAGACACCAAGCCTCCTTTGAAAATGGCATAAGATCATACCAAATTTTTTCTCTCACGGTTCCTTCTATCACAGAGCTATACACACTGATCCCCACTGTCATCTCTGCTATCAAAGTACTGACCCCAGCAttccaaaccctagaccgtaaaactGAAATTGAACCAGATACACCAGAAGAGAATTCAGACCCCAAGAGGATCCAAGGAAATGTTGAGTTCAAGAATGTGAAGTTCAACTATCCATTAAGACCTGAGGTGACTGTTCTTGACAATTTCAGTTTAAGAATCGAAGCTGGATCAAAGGTGGCTTTTGTGGGGCCTAGTGGAGCTGGGAAATCCTCTGTAATGGCCCTTTTACTAAGATTCTACGACCCAATACAagggaagttattcattgatAAGAAAGACATAAAAGAGTATAATCTAAGATGGTTAAGAACACAAATAGGGCTGGTACAACAGGAGCCACTGCTTTTCAACTGCTCAATAAGAGACAACATTTGCTATGGGAACAATGGGGCTTCAGAAAGTGAAATAGTGGAGGCTTCAAGAGAAGCAAACATACATGAATTTGTGAGTAATCTGCCAAATGGGTATGATACCGTCGTGGGGGAGAAAGGATGTCAGCTCTCAGGAGGGCAAAAGCAAAGAATAGCAATTGCCAGAACCTTACTGAAGAAACCTGCGATTTTGCTACTTGATGAAGCAACAAGTGCTCTTGATGCTGAGTCTGAAAGAACAGTAATAAATGCTTTGAAAGCAATAAATCTGAAGGAAGGAAGTGGGTCAAATTCAAGAACAACCCAGATCACAATAGCACATAGGCTTTCCACAATAATAAACTCAGATACCATAGTCGTTATGGAGAAAGGCAAAATTGTTGAGATGGGGTCCCACTCAACTTTGCTAGAATCAGAGGCAGGACTTTACTCTAGGTTATCCAGGCTGCAGAGCTTTGAAGAAAGCTGA 3414 0.4095 MYASERQLVRIRLAYLRAVLSQEIGAFDTELTNGKIISGISNHMSIIQDAIGEKLGHFTSCFATFFAGLVIAAICTWEIALLCLFVVPLILLIGATYTKRMNTISATKMIYQSQVTAMIEQTISHIKTVYAFVGESSAMKSFTENMEKLYIISKGEALIKGVGTGMFQTVSFCSWALIVWVGAVVVTAKRASGGDVIAAVMSILFGAISLTYAAPDMQLFNQAKAAGYEVFHVIQRKPLISNESQGKTPKKMEGFIDLRDVHFSYPSRPEKPILQGFSLSIPAGKTVALVGSSGCGKSTVISLVSRFYDPSKGEIFIDHHNIKDLDLKFLRGNIGAVSQEPSLFTGTIKDNLKVGKMDADDEEIQKAAEMSNAHSFISQLPDQYLTEVGQRGVQLSGGQKQRVAIARAILKNPPILLLDEATSALDSESEKLVQEALEKAMRGRTVILIAHRLSTVVNADMIVVVQNGQVSEIGTHNSLLETSTFYNALYNMQNLEPVPDLSSKNEISSAYKEDSFEDIRPQEKKIEVLEILSEHSMQEEQKSIKERSIFFRIWFGLKKRELVKTAIGAFAAAFSGISKPVFGFFIITIGVAYFKENAKRKVAVYSIIFGGIGLLSLFSHTLQHYFFGVIGEKAMGNLRRAIYSGVLRNEVGWFDKPENSVGSLTSRIMSDTAMVKIIIADRMSVIVQCISSVLIATGVSMYVNWRMGLVAWAVMPCHFIGGLVQAKSAKGFSGDYSAAHSGLVALASESTTNIRTIASFCHEEEVMKKAKTSLDIPKKKYRIESIKYGIIQGFSLCLWNIAHAVALWYTTILVDRHQASFENGIRSYQIFSLTVPSITELYTLIPTVISAIKVLTPAFQTLDRKTEIEPDTPEENSDPKRIQGNVEFKNVKFNYPLRPEVTVLDNFSLRIEAGSKVAFVGPSGAGKSSVMALLLRFYDPIQGKLFIDKKDIKEYNLRWLRTQIGLVQQEPLLFNCSIRDNICYGNNGASESEIVEASREANIHEFVSNLPNGYDTVVGEKGCQLSGGQKQRIAIARTLLKKPAILLLDEATSALDAESERTVINALKAINLKEGSGSNSRTTQITIAHRLSTIINSDTIVVMEKGKIVEMGSHSTLLESEAGLYSRLSRLQSFEES 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1390 1137 PANTHER OS08G0153200 PROTEIN 1 1133 - -
Sto5g1390 1137 Gene3D - 246 494 IPR027417 -
Sto5g1390 1137 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 566 850 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto5g1390 1137 Gene3D ABC transporter type 1, transmembrane domain 2 826 IPR036640 GO:0005524|GO:0016021
Sto5g1390 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 879 1132 IPR027417 -
Sto5g1390 1137 ProSitePatterns ABC transporters family signature. 395 409 IPR017871 GO:0005524
Sto5g1390 1137 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 886 1130 IPR003439 GO:0005524
Sto5g1390 1137 CDD ABC_6TM_Pgp_ABCB1_D2_like 555 868 - -
Sto5g1390 1137 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 256 492 IPR003439 GO:0005524
Sto5g1390 1137 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 230 - -
Sto5g1390 1137 SMART AAA_5 913 1107 IPR003593 -
Sto5g1390 1137 SMART AAA_5 283 469 IPR003593 -
Sto5g1390 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 493 IPR027417 -
Sto5g1390 1137 ProSitePatterns ABC transporters family signature. 1025 1039 IPR017871 GO:0005524
Sto5g1390 1137 CDD ABC_MTABC3_MDL1_MDL2 256 493 - -
Sto5g1390 1137 SUPERFAMILY ABC transporter transmembrane region 555 870 IPR036640 GO:0005524|GO:0016021
Sto5g1390 1137 Gene3D - 876 1136 IPR027417 -
Sto5g1390 1137 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 222 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto5g1390 1137 Pfam ABC transporter transmembrane region 2 207 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto5g1390 1137 Pfam ABC transporter transmembrane region 567 829 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto5g1390 1137 Pfam ABC transporter 274 423 IPR003439 GO:0005524
Sto5g1390 1137 Pfam ABC transporter 904 1053 IPR003439 GO:0005524
Sto5g1390 1137 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 1133 IPR039421 -
Sto5g1390 1137 SUPERFAMILY ABC transporter transmembrane region 2 238 IPR036640 GO:0005524|GO:0016021
Sto5g1390 1137 CDD ABC_MTABC3_MDL1_MDL2 886 1132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1390 Sto-Chr5 9503490 9508206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1390 1 1137 Calmodulin-binding Proteins AT2G36910 41.197 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1390 K05658 - zju:107414909 1714.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1390 5 9503490 9508206 Sto5g1390 5 9503490 9508206 ECH