Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1357 ATGCTCTGCTCCGCCCCTCCCGCTAAGTCCGGTTCCAACTGGCTCGACCGCCTCCGCTCCATCAAGGGCATCCCCACCGCCGACGACCTCGACCTCGACTCTTTCCTctccacccaccaccactcctCCGACCCCCCAACCCGCCTCTGCAATCGGACTCGGCTCCCCGACTTATCCCCACCCGAATCCCCCGACCCCATCCCTCTCACCTCCCTCATCGCCGACCTCTTCAGCATCACCCAAAGCTCCAAACTTTCCCGCAAGAAGTGCCCCAGAAAGCagacaaaccccaaatccttcctcccttcttcttcctcttcctcttcgtCTCTGAGTGGCAGTAGTAGAATCATCCACTGTGCGCCAAAGGATGACATTGACAATACTGTCCCCTGTACGAATTCTTCTTCCGTTAATAATAAGCGTGTCTTGGAAATGGGAGTCAAAGTGGAGAATAATACGGCTTCTTGGGATGAGGATGTGGAAGAGGTGGAGGAGAGTGGGGGGAATGAGTTGAAGGGGTTTTCCAAGAGTGAGGTGACTGTGATTGACACCAGTTGTTCGGATTGGAAGGTTGAGAAGTTTGTGTTTAGGAAGAAGAGTGTGTGGAAAGTcagagagaagaaagggaaatcCAAGCttttggggaagaagaagaggaagggcaGTTTTGGGTTTGATAATAATAAGGAACTCAAGCTTCTCCAGTCTCATCAATTTGGATCCTCCCTAGTAGAAACTGATATGCAAGAGCTAATCACGAGATCTACCCAAGGACTCAATACTGAGCAGAAGATGAAAGATGTAAATGAAGACACACCTGAGGATGTCCCAAAGCCTCCTCCCAAAAAGAGGCAACACAGTAGAAGCCAAGCGCTTTTCAAATATGTTTCTTCCCCTCACTGGATTCACCAAGTCTTGACAATATCGTTCTTGTTATGCTTCTTCTATGAATCTATGGCGTTTCATACATACCCATTAACGCTTTCAGCTTCCCTTCATTCAGTTTCAGCCTTTTATCCTCAACCATTTTTCTCCGATGCGAAGGTTACCCAACCGTCGAGATCAGGTACGTTCAAACTACTATCAAGCAAGGAGTGTTTCCGACACACCACGCATGCTTTCTTCCAATGCCGATGCAGTAACTCTCTATCCAATCCCGTAGCTGAAACGGGAAtgcttttctctttctttcgaGAAATTGGGGTGGGCTATGAGGAATCCCAAATGCTGTTGGCCAATCATCCTGAGCTTTCGTTGGCGCCTTTGGATTCATTGCGCGCTCGGGTTCGTTCTTTACAGTCTATTCTTGGGTTTGATCATCTTGCTCTGTATAACTTGGTTACGAAGCGTCCGACTGTATTAACAGCTAAGGAAATCGACCCTTTGATATGTTTTTTGAGAGATGAATTGGAAAGGAAGCTAGAGCAAGCACAGATGAAACGCCTCATATCTGGTACAGAACCAAGGTTTTTTGTGGGTTTTGATCAAAAGGTGAAACTGCTTCTCAACCGAGGAGTTCCCCGTGAGAAGATTATCCACGTGCTCAATAATGTGAATTTGACAAAGGCACTGTGTCATAGGTCTGTGGATGAAATTAATCGAACCATAGATTTCTTAAACCCCTTTGGTGGCATTAATCTAATTGTGAGGCGTCCTGCAATTTTCAATTATGATTTGGATAATCAGTTGATTCCGAGAACCAAATTTTTGATTGAGCTTAGTGGAGGAGATGAGGATGGCACTGGAAAGGTGTTGCGTAAGCTCCCGGCAATTTTGAGTTACCGTGTGGAGCATGTGGAGGGCCATGTAGAGTTCCTGAAATCTTTTGCTGGCCTGAATGAGCAAGAAATATTTCGGATAATACAGATATTCCCTAGTATTGTTAGTGCTAGCAGAGAAAGGAAGCTGCGTCCTAGGATAGAGTTTCTCAAGGAATGTGGATTGGATTCAGACGATATCTTCAAATTCTTGATAAAAGCACCTTTGTTTCTAGGCCATTCATTTCATGAGAACATTGCTTATAAACTTGTGTTTCTGGTTAAGATTGGGTATAGATATAGGACAAAGGACTTGGCAATGGCAATAGGATCTACCACTAGAACAAGCTGTGAGAACTTGCAAAAGGTAATTGATCTATTCTTGAGTTATGGGCTTTCATGCGAAGACATTGTTGCTATGAGCAAGAGGCATCCTCAGATACTGCAGTACAACCATAAATCTTTAGAGAAGAAGATAAAGTACTTAATAGAGGAAATGGGTCGCGATATTGAGGAGTTACTGGTTTTTCCTGCATTCCTTGGTTACAAACTAGATGACAGAATTAAGCAAAGGTTTGAAGAAAAGAGGAGCAAGAGGGGAGAAAGAATGTCTCTAAATAAGCTTTTAACTATTTCAACTGAGAGATTCACTCGGAAAAGAAAGAAGGCCACTGCACCTGATGCAATAGAAATTATATGA 2460 0.4199 MLCSAPPAKSGSNWLDRLRSIKGIPTADDLDLDSFLSTHHHSSDPPTRLCNRTRLPDLSPPESPDPIPLTSLIADLFSITQSSKLSRKKCPRKQTNPKSFLPSSSSSSSSLSGSSRIIHCAPKDDIDNTVPCTNSSSVNNKRVLEMGVKVENNTASWDEDVEEVEESGGNELKGFSKSEVTVIDTSCSDWKVEKFVFRKKSVWKVREKKGKSKLLGKKKRKGSFGFDNNKELKLLQSHQFGSSLVETDMQELITRSTQGLNTEQKMKDVNEDTPEDVPKPPPKKRQHSRSQALFKYVSSPHWIHQVLTISFLLCFFYESMAFHTYPLTLSASLHSVSAFYPQPFFSDAKVTQPSRSGTFKLLSSKECFRHTTHAFFQCRCSNSLSNPVAETGMLFSFFREIGVGYEESQMLLANHPELSLAPLDSLRARVRSLQSILGFDHLALYNLVTKRPTVLTAKEIDPLICFLRDELERKLEQAQMKRLISGTEPRFFVGFDQKVKLLLNRGVPREKIIHVLNNVNLTKALCHRSVDEINRTIDFLNPFGGINLIVRRPAIFNYDLDNQLIPRTKFLIELSGGDEDGTGKVLRKLPAILSYRVEHVEGHVEFLKSFAGLNEQEIFRIIQIFPSIVSASRERKLRPRIEFLKECGLDSDDIFKFLIKAPLFLGHSFHENIAYKLVFLVKIGYRYRTKDLAMAIGSTTRTSCENLQKVIDLFLSYGLSCEDIVAMSKRHPQILQYNHKSLEKKIKYLIEEMGRDIEELLVFPAFLGYKLDDRIKQRFEEKRSKRGERMSLNKLLTISTERFTRKRKKATAPDAIEII 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1357 819 Pfam mTERF 396 682 IPR003690 GO:0003690|GO:0006355
Sto5g1357 819 Pfam mTERF 638 803 IPR003690 GO:0003690|GO:0006355
Sto5g1357 819 MobiDBLite consensus disorder prediction 256 290 - -
Sto5g1357 819 MobiDBLite consensus disorder prediction 84 115 - -
Sto5g1357 819 MobiDBLite consensus disorder prediction 39 69 - -
Sto5g1357 819 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF8, CHLOROPLASTIC 398 810 - -
Sto5g1357 819 PANTHER CGI-12 PROTEIN-RELATED 398 810 IPR003690 GO:0003690|GO:0006355
Sto5g1357 819 MobiDBLite consensus disorder prediction 96 115 - -
Sto5g1357 819 MobiDBLite consensus disorder prediction 265 283 - -
Sto5g1357 819 SMART mt_12 757 788 IPR003690 GO:0003690|GO:0006355
Sto5g1357 819 SMART mt_12 655 686 IPR003690 GO:0003690|GO:0006355
Sto5g1357 819 SMART mt_12 725 756 IPR003690 GO:0003690|GO:0006355
Sto5g1357 819 SMART mt_12 409 440 IPR003690 GO:0003690|GO:0006355
Sto5g1357 819 SMART mt_12 619 650 IPR003690 GO:0003690|GO:0006355
Sto5g1357 819 SMART mt_12 583 614 IPR003690 GO:0003690|GO:0006355
Sto5g1357 819 SMART mt_12 445 474 IPR003690 GO:0003690|GO:0006355
Sto5g1357 819 SMART mt_12 546 577 IPR003690 GO:0003690|GO:0006355
Sto5g1357 819 Gene3D Transcription termination factor 3, mitochondrial 584 812 IPR038538 -
Sto5g1357 819 Gene3D Transcription termination factor 3, mitochondrial 376 583 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1357 Sto-Chr5 9288412 9295758 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto5g1357 mTERF 1.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1357 - - jre:109007533 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1357 5 9288412 9295758 Sto5g1357 5 9288412 9295758 ECH