Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1347 ATGAAGTACATCCATCATCTCACACTCACACttgtcctcttcttcttccaactCGTCCATCTTCATGGCGTCCCCATGAAGAAGAAACCAAGTCTCAACCAATTCACAGACAGAGAAGCTCTTCTTTCCTTCAAATCCCAAATCACCCACGACCCCAACAATTCTCTCTCTCATTGGTCTTCCAATTCCACTTCCTCTCACTGTACCTGGTATGGTGTCTCCTGCTCCAACCTTGGAAACAGAGTTCAATCTCTTCACTTATCAGGACTCCGCCTTTCTGGAATCCTCTCCCCTCACCTCTCCAACCTCTCTTACCTTCACTCCCTTAACCTCTCCTTCAACGCCTTTCATGGCCATATTCCCCACCACCTCCTCACTCGCCTCCCATTTCTCACTAATCTCTCATTAGCTTCCAACAATCTCACTGGTACACTTCCTGATCTGCATCTCTCCCGTCTCTCGCCACTTCAAATTCTCGACTTATCTATCAACAGTCTCACCGGAAAACTCCCTCCTCATCTCGGAAACCTCTCTTCTCTCATCAATCTTTCCTTAGGCCGCAACCACTTCTCCGGCGAAATCCCGCCGGAATTAGCCGATCTTCGCAACCTCTCCCATCTTCAATTCTTCGACAACGATCTCTCCGGCGACTTCCCCTCTTCCATCCTCAACCTCTCTTCCTTGCTCTTCTTATCTCTCACAAACAATCACCTCACCGGAGAATTACCCGGAAACATCGGTCACGCCCTTCCCAATCTCAAGAGCCTCTTCCTCGCCAACAATGCGTTCCGAGGCGTGATTCCCGCCTCCATATCCAATGCCACGTGTCTCGAAGATCTCGACCTCTCCAACAATCAGTTTCGCGGGTGGGTCCCTCTGCTGTTCAACAACCTCAACAAACTCACCAATTTGAATCTCGGCGCTAACCGCCTCTCTTCCACCACGCGACTCAACTCTCACCTCTTTGAATCCCTCGCGAACTCCACGCGCTTGCAAGTTTTCAGGATCTATAGCAATCAATTAACTGGAGAACTCCCTCGCTCGGTTTCGAATCTGTCCTCCGACCTCCAACATTTTTGTGTTGCGGATAATTCCTTAACCGGTAAAATCCCTATGGGCATGGGGAAATTTCAAAACCTCTTGTCTTTGTCTTTAGAAATGAATGATTTCACTGGAGGGATACCGGAGGAAATAGGAGGATTGAACAAATTGGTGCAACTTTTATTGTACCAAAACAGGTTGTCCGGAGAAATTCCTAATATTTTAGGCAATTTCTCCCAATTGAATACGCTAGCACTGGGTAATAATCAGTTCACGGGTACAATTCCTGCTAGTATTGGAGAGTGCAAGCAATTAAATTTTGTTGACCTCAGAATGAATAGACTTCATGGGACCATACCCAAGGAGATTTTTGAGCTTTCTGGGTTGAATACCTTGTACTTAACAGACAACCAATTGTGGGGGTTTATTCCTGAGGTAATTGGAGCATGTTCGGGTTTGCAGTATCTTGGAATGGCAAGAAACAACATAAGTGGCCCAATCCCAAGTAGGTTGGGGGATTTGAGGTCTCTGGAGGTTCTTGATTTGTCTTTGAATATCCTGTCTGGCCAAATTCCTGAGAAGTTGGAGAAGCTTGAGTACATGGTCAACTTAAACTTGTCTTTCAATCAGTTGGAAGGACAAGTTCCTATGGAAGGCGTTTTCACCAACCTTACGAAGGTTGATCTCCAAGGTAACCCCAAGCTCTGTAGTCTCAACCACACAGTTGCACACAAGTGGGGAATCTTGCTCTGTgataatccaagaaaaagaaaaagatcacTTTTAGTGGTCCCCATCATAGTTGCAATTGTGGGGGCCACTGCTTTACTTGTAACCCTTTTCGTCCTGTTTTGGGTGAGTTGTAAGAAGAAAATTACTACAACTTCATCACCACATGGTCATCTCAAAGGCGTTCATGAGACCATATCTTACGGTGAAATCAAGCTAGCTACCAACAATTTTGCAGCTGAGAATTTGATAGGCAAAGGTGGTTTTGGCTATGTGTACAAGGGCGTGTTCAACATAAACAGCACAGATGAAGAAGAAGCCACCACTACCACTACCTTTGCCGTGAAAGTCCTGGATTTGAAACAGAGCAAAGCTTGCAAGAGTTTCAATGCGGAATGTGAAGCTCTGAGAATTGTTCGGCACAGGAACTTGGTGAAGGTCATCACTTCTTGCTCTAGCGTTGACTACAAGGGAAACGAGTTTAAGGCGTTGCCTAGCAATGTGCTATTGGACCAAAACATGGTGGCCCATGTTGGAGATTTCGGATTGGCTAGGATTCTTTCGCAGAATCCATCACCAAATTACGAGAGCAGCACTGTGGGACTAAAGGaaTACGGTGTGGGAGGCAAAGCTTGGAGTCAAGGGGATGTGTACAACTTTGGGATCCTACTGCTAGAGATGATGATAGCGAGAAGACCAACGGATGAGATGTTCAAGGAAGGTTTAAGCCTAACAAAACTGGGTTCAAGCATAATGGATGATATCAATAAAGTAAGGAAGGTGTGTGATGGGAGGTTGTTTAAGGATTATGATGAATACTCAACAACAAGCTCATCAAGTAATAATGGTAGTGATGGTGATGATAGTGTAGAAAAGTGTATAGGTGGGGTGATAGGAGTAGGATTGTGTTGTGCAGCTCAAGATGCCAAAGATCGTTTGAACATGAAAGAGGTATCCACAAAATTGCAAGCAATCAGGCGTTCTATATATGTTGCCGCTCTGTGA 2775 0.4472 MKYIHHLTLTLVLFFFQLVHLHGVPMKKKPSLNQFTDREALLSFKSQITHDPNNSLSHWSSNSTSSHCTWYGVSCSNLGNRVQSLHLSGLRLSGILSPHLSNLSYLHSLNLSFNAFHGHIPHHLLTRLPFLTNLSLASNNLTGTLPDLHLSRLSPLQILDLSINSLTGKLPPHLGNLSSLINLSLGRNHFSGEIPPELADLRNLSHLQFFDNDLSGDFPSSILNLSSLLFLSLTNNHLTGELPGNIGHALPNLKSLFLANNAFRGVIPASISNATCLEDLDLSNNQFRGWVPLLFNNLNKLTNLNLGANRLSSTTRLNSHLFESLANSTRLQVFRIYSNQLTGELPRSVSNLSSDLQHFCVADNSLTGKIPMGMGKFQNLLSLSLEMNDFTGGIPEEIGGLNKLVQLLLYQNRLSGEIPNILGNFSQLNTLALGNNQFTGTIPASIGECKQLNFVDLRMNRLHGTIPKEIFELSGLNTLYLTDNQLWGFIPEVIGACSGLQYLGMARNNISGPIPSRLGDLRSLEVLDLSLNILSGQIPEKLEKLEYMVNLNLSFNQLEGQVPMEGVFTNLTKVDLQGNPKLCSLNHTVAHKWGILLCDNPRKRKRSLLVVPIIVAIVGATALLVTLFVLFWVSCKKKITTTSSPHGHLKGVHETISYGEIKLATNNFAAENLIGKGGFGYVYKGVFNINSTDEEEATTTTTFAVKVLDLKQSKACKSFNAECEALRIVRHRNLVKVITSCSSVDYKGNEFKALPSNVLLDQNMVAHVGDFGLARILSQNPSPNYESSTVGLKEYGVGGKAWSQGDVYNFGILLLEMMIARRPTDEMFKEGLSLTKLGSSIMDDINKVRKVCDGRLFKDYDEYSTTSSSSNNGSDGDDSVEKCIGGVIGVGLCCAAQDAKDRLNMKEVSTKLQAIRRSIYVAAL 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1347 924 SMART LRR_typ_2 103 127 IPR003591 -
Sto5g1347 924 SMART LRR_typ_2 521 545 IPR003591 -
Sto5g1347 924 SMART LRR_typ_2 225 249 IPR003591 -
Sto5g1347 924 SMART LRR_typ_2 275 297 IPR003591 -
Sto5g1347 924 SMART LRR_typ_2 177 201 IPR003591 -
Sto5g1347 924 SMART LRR_typ_2 425 449 IPR003591 -
Sto5g1347 924 SMART LRR_typ_2 298 324 IPR003591 -
Sto5g1347 924 SMART LRR_typ_2 250 273 IPR003591 -
Sto5g1347 924 SMART LRR_typ_2 473 497 IPR003591 -
Sto5g1347 924 Pfam Protein tyrosine and serine/threonine kinase 671 742 IPR001245 GO:0004672|GO:0006468
Sto5g1347 924 Pfam Protein tyrosine and serine/threonine kinase 757 829 IPR001245 GO:0004672|GO:0006468
Sto5g1347 924 Gene3D Phosphorylase Kinase; domain 1 649 748 - -
Sto5g1347 924 PANTHER RECEPTOR-LIKE PROTEIN 55 483 754 - -
Sto5g1347 924 PANTHER RECEPTOR-LIKE PROTEIN 55 6 101 - -
Sto5g1347 924 PANTHER RECEPTOR-LIKE PROTEIN 55 102 171 - -
Sto5g1347 924 PANTHER RECEPTOR-LIKE PROTEIN 55 176 492 - -
Sto5g1347 924 PANTHER RECEPTOR-LIKE PROTEIN 55 755 912 - -
Sto5g1347 924 Pfam Leucine rich repeat 251 311 IPR001611 GO:0005515
Sto5g1347 924 SUPERFAMILY RNI-like 182 560 - -
Sto5g1347 924 SUPERFAMILY Protein kinase-like (PK-like) 651 915 IPR011009 -
Sto5g1347 924 SUPERFAMILY L domain-like 52 247 - -
Sto5g1347 924 ProSitePatterns Protein kinases ATP-binding region signature. 674 706 IPR017441 GO:0005524
Sto5g1347 924 Gene3D Ribonuclease Inhibitor 195 294 IPR032675 -
Sto5g1347 924 Gene3D Ribonuclease Inhibitor 34 194 IPR032675 -
Sto5g1347 924 Gene3D Ribonuclease Inhibitor 295 591 IPR032675 -
Sto5g1347 924 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 101 - -
Sto5g1347 924 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 755 912 - -
Sto5g1347 924 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 176 492 - -
Sto5g1347 924 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 483 754 - -
Sto5g1347 924 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 102 171 - -
Sto5g1347 924 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Sto5g1347 924 Gene3D Transferase(Phosphotransferase) domain 1 752 920 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1347 Sto-Chr5 9223363 9226517 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1347 36 923 Receptor kinase-like Gene Family AT3G47570 34.665 9.13e-147 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto5g1347 PK_Tyr_Ser-Thr 1.5e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1347 - - mtr:MTR_3g092390 748.043