Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1345 ATGGGTTATCTGAGTAGGTCTTCAAAGACCCTAAGGCAATCAAAGTTCTTGTATCACttgtttttttcctttccattgTCCTCTATATGTGGAGGCAAATCATTGATCGGTGGATTACCTCATCATCGCTTTGCTCTGAGCCGTGCATTGTTCTGTTCTCATGCTCGCCAAAATAGCAAAGAAAATAATCGCTTAGAATTGAGTGAGTATCCCCCGGAACTAATTCGGAACTTCTCAATAATTGCACATATAGATCATGGCAAGTCCACTCTTGCTGATCGGTTGCTGGAGCTCACTGGGACTATCAAGAAAGGCCATGGTCAGCCTCAGTATCTTGACAAATTGCAGgtagagagagaaaggggAATCACTGTTAAAGCCCAGACAGCAACAATGTTCTATAAGCACAACATTCAAGATACGAACTATAGCGATGGGCAAGGTCCACCTAGCTTTCTGTTAAATCTTATTGACACCCCTGGGCATGTGGACTTCAGTTATGAAGTGTCAAGGTCACTTGCAGCTTGTCAGGGAGCCCTTTTGGTGGTCGATGCCGCTCAAGGAGTCCAAGCACAAACTGTTGCTAATTTTTATCTTGCTTTCGAATCTAACCTAACAATTATACCTGTTATAAACAAGATAGACCAGCCAACTGCTGATCCTGATGGTGTTAAAGCACAGCTAAAATCAATGTTTGATCTTGACCCAAGTGATGCACTTTTAACATCTGCTAAAACAGGACAAGGTCTTGATCAAGTCCTGCCTGCTGTTATACAGCGCATACCTCCTCCTCCTGGGAAGAGTGGTTCTCCTTTAAGAATGCTTTTGCTGGATTCATATTATGATGAATACAAAGGAGTAATATGCCATGTTGCTGTTGTTGATGGTGCTTTGCGCAAGGGGGACAAAATTTCTGCTGCAGCAACTGGCCAGTCTTATGAAGCTTTGGATGTAGGGATCATGCATCCTGAACTCACCCCTACTGGAATCCTGCTTACTGGACAGGTAGGGTATGTTGTAAGTGGCATGCGCTCAACCAAAGAGGCTCGAGTTGGAGATACACTTTTCCATACACGAACTATTATTGAGCCCCTTCCAGGCTTCAAGCCAGCGAAACATATGGTGTTCTCTGGTCTTTATCCCGCGGATGGATCTGATTTTGATGCACTCAACCATGCAATAGAGAGATTGACGTGCAATGATGCCAGTGTCTCTATCACTAAAGAAAGTAGCACAGCTCTTGGTCTGGGGTTCAGGTGTGGTTTCTTAGGCTTACTACACATGGATGTTTTTCATCAGCGGCTTGAACAGGAGTATGGAGCTCATGTTATTTCTACTGTTCCCACAGTGCCGTACATATTTGAGTATTCTGATGGAAGCAAATTGCAGGTTGAGAATCCTGCTGCATTACCCTCAAATCCCAAGCAACGAGTGACAGCCTGTTGGGAACCCACTGTGATGGCTACAATTATCATTCCTAGTCAGTATGTGGGGTCTGTTATTACCCTTTGCTCTGAGCGAAGAGGCCAGCAACTGGAGTACTCATTCATTGACAGTCAACGGGTTTTCATGAAGTATCGGATGCCTCTGAGGGAAATTGTTGTTGACTTTTACAATGAATTGAAGAGTATAACATCAGGTTATGCTTCATTTGATTATGAGGATGCAGATTATCAACAATCTGATCtggtgaaacttgatattctcttGAATGGACAACCAGTTGATGCAATGGCTACCATTGTTCATAACATGAAAGCATATCGTGTAGGGCGTGAATTGGTCGAGAAATTGAAGAAAGCTATAGACAGGCAAATGTTCGAGATATCAATACAAGCAGCTATTGGGTCAAAAGTTATAGCAAGGGAGACGATTTCAGCAATGAGGAAAAATGTTCTTGCTAAGTGTTATGGTGGTGATGTTACTCGAAAGAGGAAACTATTGGAGAAGCAAAAGGAAGGAAAGAAGCGAATGAAACGAGTTGGTTCTGTTGATATACCACAAGAGGCATTCCATGAACTATTGAAGGTTTCATAG 2037 0.4183 MGYLSRSSKTLRQSKFLYHLFFSFPLSSICGGKSLIGGLPHHRFALSRALFCSHARQNSKENNRLELSEYPPELIRNFSIIAHIDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHNIQDTNYSDGQGPPSFLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLTIIPVINKIDQPTADPDGVKAQLKSMFDLDPSDALLTSAKTGQGLDQVLPAVIQRIPPPPGKSGSPLRMLLLDSYYDEYKGVICHVAVVDGALRKGDKISAAATGQSYEALDVGIMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTLFHTRTIIEPLPGFKPAKHMVFSGLYPADGSDFDALNHAIERLTCNDASVSITKESSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKLQVENPAALPSNPKQRVTACWEPTVMATIIIPSQYVGSVITLCSERRGQQLEYSFIDSQRVFMKYRMPLREIVVDFYNELKSITSGYASFDYEDADYQQSDLVKLDILLNGQPVDAMATIVHNMKAYRVGRELVEKLKKAIDRQMFEISIQAAIGSKVIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1345 678 Gene3D - 562 636 IPR038363 -
Sto5g1345 678 Gene3D - 448 561 - -
Sto5g1345 678 SUPERFAMILY EF-G C-terminal domain-like 374 451 IPR035647 -
Sto5g1345 678 TIGRFAM small_GTP: small GTP-binding protein domain 78 253 IPR005225 GO:0005525
Sto5g1345 678 Gene3D - 73 266 IPR027417 -
Sto5g1345 678 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 73 265 IPR000795 GO:0003924|GO:0005525
Sto5g1345 678 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 113 128 IPR031157 -
Sto5g1345 678 PANTHER TRANSLATION FACTOR GUF1-RELATED 62 676 IPR006297 GO:0005525
Sto5g1345 678 Pfam GTP-binding protein LepA C-terminus 570 676 IPR013842 -
Sto5g1345 678 CDD LepA 76 261 - -
Sto5g1345 678 CDD EF4_II 272 357 - -
Sto5g1345 678 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 62 676 - -
Sto5g1345 678 TIGRFAM lepA: elongation factor 4 74 677 IPR006297 GO:0005525
Sto5g1345 678 Hamap Elongation factor 4 [lepA]. 71 678 IPR006297 GO:0005525
Sto5g1345 678 Pfam Elongation factor Tu GTP binding domain 75 262 IPR000795 GO:0003924|GO:0005525
Sto5g1345 678 Gene3D Elongation Factor G (Translational Gtpase), domain 3 366 447 - -
Sto5g1345 678 CDD EF4_III 373 448 - -
Sto5g1345 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 304 IPR027417 -
Sto5g1345 678 CDD lepA_C 483 562 IPR035654 -
Sto5g1345 678 Pfam Elongation factor G C-terminus 483 568 IPR000640 -
Sto5g1345 678 Gene3D Translation factors 268 364 - -
Sto5g1345 678 SUPERFAMILY EF-G C-terminal domain-like 482 576 IPR035647 -
Sto5g1345 678 PRINTS GTP-binding elongation factor signature 77 90 IPR000795 GO:0003924|GO:0005525
Sto5g1345 678 PRINTS GTP-binding elongation factor signature 120 128 IPR000795 GO:0003924|GO:0005525
Sto5g1345 678 PRINTS GTP-binding elongation factor signature 155 165 IPR000795 GO:0003924|GO:0005525
Sto5g1345 678 PRINTS GTP-binding elongation factor signature 171 182 IPR000795 GO:0003924|GO:0005525
Sto5g1345 678 PRINTS GTP-binding elongation factor signature 207 216 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1345 Sto-Chr5 9210207 9214381 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1345 75 216 Eukaryotic Initiation Factors Gene Family AT1G56070 39.583 7.01e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1345 K21594 - qsu:111987059 1161.36