Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1343 ATGGCTTCCGGTGATGCTatcaactcttcttcttctaacgTTCCAGCAACTGTGCCTCTTCACAGACCATTGCCTGATACATCCAAAATAGAGGCGTTTGATGGGAAAAATTTTAGACGTTGGCAAGAGCGTGTTTACTCAATGCTGGATATGCACGGAGTTGTTGATGTTCTTGAGAAGTCTAAACCTGCTGATGATGCTACACAAACCCAGAAAGATTTTTGGCAACATGCCAACAAGGTTTGTAGGCATACTTTGCTTAGCACATTATCTAATGATCTATTTGACATTTACAGTGTTTACAAAGAGGCAAACAAAATTTGGGAATCCTTGATTCTCAAATATACTGCTGAGGACGCCGGAAAACAGAAGTTTGTGGTAGGCAATTTTTATAAGTGGGAGATGGTTGATGATAAAGACATCAAACAACAAATCAACGAGTATCATAGACTTTTGGAGGAACTTCGTGCTGAGAAGATTACTCTGCCAGACGAGTTCGTGGCTGGAATTCTAATTGAGAAACTACCTGAGTCATGGAGTGCTTACAAACAACAATTGAAGCACAAACAAAAGCAACTATCACTATCTGATTTGATCACTCATATCATCATAGAGGACACTAACCGAAAGGCAATCCAAATTGCAAAAGGAAAGGAGATGACTGCTAAGGCCAATCTGGTTGAGTCACACAAAAGATCCCAAATCATGGACCCAAACAACGCTCTCTCTGGATGGACTTCAAATTCCTCCACCTGCACTTGGTATGGTGTCTCCTGCTTCAAAAACACAGTCCTCTCTCTTAGCCTTCCAGGATTAGGCCTCCATGGTCAAATACCATCAATCCTCTTTAACCTCACTTATCTACAATACCTTGACCTCTCCCATAATTCATTCCATGGCCATATTCCACTGGAGTTATCCCATCTCTCTTATCTTAAATTTATCTCTTTAGCAGTTAACAACCTCACTGGCTCAATTCCTTCACAGTTATCCCTTTTGCAACAATTGCAATTTCTGGATTTCTCTGTCAATAACCTCACTGGCCAAATCCCTCCCCAATTTGGAAACTTTTCGTTTCTTGTTACTCTTGAATTGGCAAGGAATAGTCTTTCTGGGGAGATTCCAAGTGAGTTGGGCAATCTTCGAAACCTTAACTATCTTCAACTCTCTGAGAATTATCTCTCTGGGGAGTTCCCTATTTCCGTTTTCAACATCTCTTCATTAGCCTACATGTCTGTGACAAAGAACTTCCTTTCAGGAACATTGCCTCTGAATATTGGCCATTCTCTTCCTAATCTCAGGTTTCTCTTTCTCGCAAACAATACATTTAGGGGTGTGATTCCTAGTTCTTTATCCAATGCTTCACATCTCGAATCTCTTGATCTTTCTCATAATGAGTTTCATGGATTGCTTCCTCGTTTCACTAACACCAAAAACCTCACCTACCTAATTCTTGGTTCTAACAATTTCTCTTCCACAACCTCAACCAACTCTGAGTTCTTTGATTCACTTGCAAATTGCAAAAAGCTGAAAATTTTGATGATCAATTCTAATCAGCTAGCAGGAGAGCTTCCAAAATCTGTAGCAAATCTTTCAATCAATCTCGAAGATGTTTGTGTAGCCTCTAACTCATTCACTGGAAGAATTCCTCAGGGAATGGGGAAATTTCAAAACCTCGAATCCTTGTCTTTTGAGGATAATCATTTCAGTGGAGAGATACCAGGAGACATGGCAGCACTGAATAAACTGGTGAAACTTAAAGTGCAAGGAAACAACTTGTCTGGAGAAATCCCAGACATGTTTGGGAATTTCACGCAACTATCTCTCCTTCGAATGGGATTTAACCAATTCTCTGGAAGAATTCCATCTAGCATTGGACAGTGTAAAAGATTGAATTACTTGGACCTTGAAGTGAATAATCTTCATGGGACCATACCATATGAGATTTCTAGTCTCTCTGGCTTAATCGTCTTGTCCTTTGCTGGGAATACCCTACTTGGGTCATTCCCTTCTCAACTCAACTCCATGAAGCAGCTTCAATACTTGGACTTCTCTGGAAATCGTATTCAGATTTCTCTCCAAGGAAACAACAAGCTCTGTAGTCCTAACAAGGAAATTGCGGAAAATTTAAGAATCTTTGGGTGTGACAAAGGTAAAAAGAAGCCACCATTCTTACTCCCAACCATACTTGCAGTTACAGCTGCCTTTGTTCTATTCATGTCGATGTTCTGCATGCTGTGGATGAGATcttcccaaaaaagaaaaaacaaggaGGAGAAAAGGCGTTTATCAAGTACTCCTTTCAAAGGAGTGCCTCAAAATCTATCCTTTTATGATATTCGAGCAGCCACAAACAATTTTGcgttagaaaacttgataggtAAGGGTGGGTTTGGCTTTGTGTATAAGGGTGTGTTCAACATCAACCTAGGTGAAACTACACTTGCTGTGAAAGTCCTCGACTTGAACCAAAGCAAAGCTTCCAAAAGTTTCAATGCAGAGTGTGAAGCTCTGAAGAATGTGAGGCATAGGAACCTCGTAAAGCTCATCACTTCTTGCTCTAGCATTGATCATAAAGGTGATGACTTTCAGGCCTTGGTTATGCAATTCATGTCCAATGGTAATTTGGACACGTGGCTGTACTCAAAAGATGAAGAATCTGGGTCATCTTCTTTGACCCTTTTGCAGAGATTGAATATTGCTATAGACATAGCCAGTGCTATGGACTACTTGCACCATGATTGTGAGCCACCAGTAGTTCATTGTGATTTGAAACCTGGTAATGTGTTATTAGATGAAGATATGGTTGCacatgtgggagattttggATTAGCAAGGCTTCTTTCTCAAATTTCATCCGAATCTACAACTTTGGGACTAAAGGGTACCATTGGCTACATTCCCCCAGAATATGGTTTGGGAGGCAAAGCTTCGACCTTTGGAGATGTGTACAGTTTTGGGATTCTACTGCTTGAGATGTTCACAGGAAAAAGGCCAACTGATGAGATGTTTAAGGAAGGTTTAAGCCTCAATAAGTTAGCCTCAGCCATGGATGAGAATCAAATAGTGAAGGTAGTGGATCCAAAGCTTTTGAACCATTTTGAATGTTGCACACAAAGCTCAAGAAATGGTAATCCTAATGATGGCAAAGCCAAGCAGTGTATAGCCTCTAAGGAAATAAAATATCAGAACTTGCTAAGTGGCCACATCAGTGCAAAGCTCATTAATGCTAAGAAGAGGGGGAAAAGAAGATGGATTTTCAGGAAGCAATCTAGTGATGGTGCAGTGGTTACTCAGCTTTGTGAGGAAAGGACTATAACCACCATTGCTGATAATATTACAGCAACAAGTAATATTAGTGTCTCTCAAATACTTGATGCTGCTGAACAAAGACAAGCCATTGCTGTAGCTATGGCTTCCACAGCTGCTGCTCAGGCTGCAGTAGCATCTGCTCAAGCAGCTGTGGAGATTGTTCGTCTTTCACAGCCTTCCATGTTTGTTAAACAACACTATGCTGCCATTACTATTCAAACCTCCTTCAGAGGCTATCTGgcTAGAAGAGCTCTTGGTGCACTTAAAGGGCTAGTGAAGTTGCAGGCATTAGTGAGAGGTCATAATGTCCGCAGAAGAGCAAAATTTACTCTTCAATGCATGCAAGCTCTTGTTAGAGTTCAGACTCAGTTATGTGAAGAGCGAGCTAAGAGAATAATTACTCATCATGGAAGCACAGATTCCATTAATGTATGTATGCAGTctagagatgatgatgaagcacAGACAGTAGACAAGAAGATTCAAGCTGCCTTGAAAAGAGAAAAGGCCCTGGCTGATGCTTTCTCTCACCAGATATGGCGAACTAGTGGGGAGCCTAGTGGGAGTGAGGGAGAGCTTGAGGAAAATTCTAGATGGTGTGATGatggatggagaagaagaagaagcagcagcAGCATGTACAGTAGGAATAACTCAGGTAGTAGAGCTTCGTGCAGTGATCAAAGAGATCCCATCAAAATAGTTGAAATTGACACCTTTAGACCCTACTCCAACTCACCAGTAATTCCCAGTACTGATACAATGAGATCATCATCCTGTAGTAGCTATAAGCCTCAGTTCAATAGTCCACTAAGAACCCATAAAGGCTATTGTGATGTTTCTTTTCAGTCTCCATTAATTATGACACCATCACCAACAAAGATGAAGCATATTCAGGTGCATTCAGCTAGTCCTCGTTGCACAAAGTCTATATATTCAGTGCCTCATAGTCATAGTCATATGGCCAGCATCAACACCTACACCCATGGACCAGGGGTGAGTAGTAGTAATGGTTCCAGACCCACTTCAGTGCCAAACTATATGGCAGCCACTGCATCTGCTAAGGCTCGGGTTCGGTCCCACAGTACACCCAGGCAGAGAGCTTGA 4419 0.401 MASGDAINSSSSNVPATVPLHRPLPDTSKIEAFDGKNFRRWQERVYSMLDMHGVVDVLEKSKPADDATQTQKDFWQHANKVCRHTLLSTLSNDLFDIYSVYKEANKIWESLILKYTAEDAGKQKFVVGNFYKWEMVDDKDIKQQINEYHRLLEELRAEKITLPDEFVAGILIEKLPESWSAYKQQLKHKQKQLSLSDLITHIIIEDTNRKAIQIAKGKEMTAKANLVESHKRSQIMDPNNALSGWTSNSSTCTWYGVSCFKNTVLSLSLPGLGLHGQIPSILFNLTYLQYLDLSHNSFHGHIPLELSHLSYLKFISLAVNNLTGSIPSQLSLLQQLQFLDFSVNNLTGQIPPQFGNFSFLVTLELARNSLSGEIPSELGNLRNLNYLQLSENYLSGEFPISVFNISSLAYMSVTKNFLSGTLPLNIGHSLPNLRFLFLANNTFRGVIPSSLSNASHLESLDLSHNEFHGLLPRFTNTKNLTYLILGSNNFSSTTSTNSEFFDSLANCKKLKILMINSNQLAGELPKSVANLSINLEDVCVASNSFTGRIPQGMGKFQNLESLSFEDNHFSGEIPGDMAALNKLVKLKVQGNNLSGEIPDMFGNFTQLSLLRMGFNQFSGRIPSSIGQCKRLNYLDLEVNNLHGTIPYEISSLSGLIVLSFAGNTLLGSFPSQLNSMKQLQYLDFSGNRIQISLQGNNKLCSPNKEIAENLRIFGCDKGKKKPPFLLPTILAVTAAFVLFMSMFCMLWMRSSQKRKNKEEKRRLSSTPFKGVPQNLSFYDIRAATNNFALENLIGKGGFGFVYKGVFNINLGETTLAVKVLDLNQSKASKSFNAECEALKNVRHRNLVKLITSCSSIDHKGDDFQALVMQFMSNGNLDTWLYSKDEESGSSSLTLLQRLNIAIDIASAMDYLHHDCEPPVVHCDLKPGNVLLDEDMVAHVGDFGLARLLSQISSESTTLGLKGTIGYIPPEYGLGGKASTFGDVYSFGILLLEMFTGKRPTDEMFKEGLSLNKLASAMDENQIVKVVDPKLLNHFECCTQSSRNGNPNDGKAKQCIASKEIKYQNLLSGHISAKLINAKKRGKRRWIFRKQSSDGAVVTQLCEERTITTIADNITATSNISVSQILDAAEQRQAIAVAMASTAAAQAAVASAQAAVEIVRLSQPSMFVKQHYAAITIQTSFRGYLARRALGALKGLVKLQALVRGHNVRRRAKFTLQCMQALVRVQTQLCEERAKRIITHHGSTDSINVCMQSRDDDEAQTVDKKIQAALKREKALADAFSHQIWRTSGEPSGSEGELEENSRWCDDGWRRRRSSSSMYSRNNSGSRASCSDQRDPIKIVEIDTFRPYSNSPVIPSTDTMRSSSCSSYKPQFNSPLRTHKGYCDVSFQSPLIMTPSPTKMKHIQVHSASPRCTKSIYSVPHSHSHMASINTYTHGPGVSSSNGSRPTSVPNYMAATASAKARVRSHSTPRQRA 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1343 1472 SUPERFAMILY Protein kinase-like (PK-like) 764 1040 IPR011009 -
Sto5g1343 1472 ProSitePatterns Protein kinases ATP-binding region signature. 793 818 IPR017441 GO:0005524
Sto5g1343 1472 SUPERFAMILY L domain-like 231 492 - -
Sto5g1343 1472 Pfam gag-polypeptide of LTR copia-type 75 210 - -
Sto5g1343 1472 ProSiteProfiles IQ motif profile. 1193 1220 IPR000048 GO:0005515
Sto5g1343 1472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 919 931 IPR008271 GO:0004672|GO:0006468
Sto5g1343 1472 ProSiteProfiles Protein kinase domain profile. 787 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1343 1472 SUPERFAMILY RNI-like 402 699 - -
Sto5g1343 1472 MobiDBLite consensus disorder prediction 1 22 - -
Sto5g1343 1472 MobiDBLite consensus disorder prediction 1 17 - -
Sto5g1343 1472 Gene3D Ribonuclease Inhibitor 331 425 IPR032675 -
Sto5g1343 1472 Gene3D Phosphorylase Kinase; domain 1 747 869 - -
Sto5g1343 1472 SMART serkin_6 787 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1343 1472 Pfam Protein tyrosine and serine/threonine kinase 789 1040 IPR001245 GO:0004672|GO:0006468
Sto5g1343 1472 Pfam Protein of unknown function (DUF4005) 1428 1471 IPR025064 -
Sto5g1343 1472 Pfam IQ calmodulin-binding motif 1196 1212 IPR000048 GO:0005515
Sto5g1343 1472 Pfam IQ calmodulin-binding motif 1172 1188 IPR000048 GO:0005515
Sto5g1343 1472 ProSiteProfiles IQ motif profile. 1169 1197 IPR000048 GO:0005515
Sto5g1343 1472 Pfam Leucine rich repeat N-terminal domain 233 259 IPR013210 -
Sto5g1343 1472 Gene3D - 1167 1220 - -
Sto5g1343 1472 Gene3D Transferase(Phosphotransferase) domain 1 871 1063 - -
Sto5g1343 1472 Coils Coil 138 161 - -
Sto5g1343 1472 PANTHER OS04G0122200 PROTEIN 692 1042 - -
Sto5g1343 1472 PANTHER OS04G0122200 PROTEIN 221 689 - -
Sto5g1343 1472 MobiDBLite consensus disorder prediction 1313 1332 - -
Sto5g1343 1472 SMART iq_5 1168 1190 IPR000048 GO:0005515
Sto5g1343 1472 SMART iq_5 1191 1212 IPR000048 GO:0005515
Sto5g1343 1472 PANTHER - 692 1042 - -
Sto5g1343 1472 PANTHER - 221 689 - -
Sto5g1343 1472 Gene3D Ribonuclease Inhibitor 225 330 IPR032675 -
Sto5g1343 1472 MobiDBLite consensus disorder prediction 1314 1330 - -
Sto5g1343 1472 Gene3D Ribonuclease Inhibitor 426 709 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1343 Sto-Chr5 9186991 9201592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1343 240 1059 Receptor kinase-like Gene Family AT3G47090 34.823 9.03e-162 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto5g1343 PK_Tyr_Ser-Thr 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1343 - - gmx:100776054 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1211 6 11596963 11599102 Sto5g1343 5 9186991 9201592 ECH
Sto1g0773 1 7918179 7920213 Sto5g1343 5 9186991 9201592 ECH
Sto5g1343 5 9186991 9201592 Sto5g1343 5 9186991 9201592 ECH